Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC11.63□□□□□ -0.55
Trav5d-4Q5R1F6 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav5d-4Q5R1F6 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.63□□□□□ -0.55
Trav5d-4Q5R1F6 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav5d-4Q5R1F6 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav5d-4Q5R1F6 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav5d-4Q5R1F6 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav5d-4Q5R1F6 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trav5d-4Q5R1F6 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav5d-4Q5R1F6 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav5d-4Q5R1F6 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav5d-4Q5R1F6 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav5d-4Q5R1F6 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trav5d-4Q5R1F6 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav5d-4Q5R1F6 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC11.63□□□□□ -0.55
Trav5d-4Q5R1F6 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav5d-4Q5R1F6 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav5d-4Q5R1F6 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC11.63□□□□□ -0.55
Trav5d-4Q5R1F6 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav5d-4Q5R1F6 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav5d-4Q5R1F6 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav5d-4Q5R1F6 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav5d-4Q5R1F6 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav5d-4Q5R1F6 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC11.62□□□□□ -0.55
Trav5d-4Q5R1F6 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav5d-4Q5R1F6 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav5d-4Q5R1F6 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.62□□□□□ -0.55
Trav5d-4Q5R1F6 Gm14371-201ENSMUST00000138925 1518 ntBASIC11.62□□□□□ -0.55
Trav5d-4Q5R1F6 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav5d-4Q5R1F6 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav5d-4Q5R1F6 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav5d-4Q5R1F6 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav5d-4Q5R1F6 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav5d-4Q5R1F6 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Trav5d-4Q5R1F6 Gm15240-201ENSMUST00000118156 720 ntBASIC11.62□□□□□ -0.55
Trav5d-4Q5R1F6 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC11.62□□□□□ -0.55
Trav5d-4Q5R1F6 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC11.62□□□□□ -0.55
Trav5d-4Q5R1F6 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav5d-4Q5R1F6 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav5d-4Q5R1F6 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC11.62□□□□□ -0.55
Trav5d-4Q5R1F6 Gm18905-201ENSMUST00000205454 928 ntBASIC11.62□□□□□ -0.55
Trav5d-4Q5R1F6 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC11.62□□□□□ -0.55
Trav5d-4Q5R1F6 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav5d-4Q5R1F6 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav5d-4Q5R1F6 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav5d-4Q5R1F6 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav5d-4Q5R1F6 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Trav5d-4Q5R1F6 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav5d-4Q5R1F6 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav5d-4Q5R1F6 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav5d-4Q5R1F6 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav5d-4Q5R1F6 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav5d-4Q5R1F6 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav5d-4Q5R1F6 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav5d-4Q5R1F6 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav5d-4Q5R1F6 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav5d-4Q5R1F6 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav5d-4Q5R1F6 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav5d-4Q5R1F6 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav5d-4Q5R1F6 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav5d-4Q5R1F6 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav5d-4Q5R1F6 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav5d-4Q5R1F6 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav5d-4Q5R1F6 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5d-4Q5R1F6 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5d-4Q5R1F6 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Trav5d-4Q5R1F6 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5d-4Q5R1F6 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5d-4Q5R1F6 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5d-4Q5R1F6 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trav5d-4Q5R1F6 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5d-4Q5R1F6 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5d-4Q5R1F6 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5d-4Q5R1F6 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5d-4Q5R1F6 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trav5d-4Q5R1F6 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5d-4Q5R1F6 AC168058.1-201ENSMUST00000219521 2282 ntBASIC11.61□□□□□ -0.55
Trav5d-4Q5R1F6 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5d-4Q5R1F6 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5d-4Q5R1F6 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5d-4Q5R1F6 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5d-4Q5R1F6 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5d-4Q5R1F6 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5d-4Q5R1F6 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.61□□□□□ -0.55
Trav5d-4Q5R1F6 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5d-4Q5R1F6 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5d-4Q5R1F6 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5d-4Q5R1F6 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5d-4Q5R1F6 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5d-4Q5R1F6 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Trav5d-4Q5R1F6 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC11.61□□□□□ -0.55
Trav5d-4Q5R1F6 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5d-4Q5R1F6 Gm15770-201ENSMUST00000117498 584 ntBASIC11.61□□□□□ -0.55
Trav5d-4Q5R1F6 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5d-4Q5R1F6 Gm15487-201ENSMUST00000122373 465 ntBASIC11.61□□□□□ -0.55
Trav5d-4Q5R1F6 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5d-4Q5R1F6 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Trav5d-4Q5R1F6 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC11.61□□□□□ -0.55
Trav5d-4Q5R1F6 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5d-4Q5R1F6 Gm17795-201ENSMUST00000214505 757 ntBASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms