Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Gm24447-201ENSMUST00000083977 338 ntBASIC16.09■□□□□ 0.17
Rnf20Q5DTM8 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC16.09■□□□□ 0.17
Rnf20Q5DTM8 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf20Q5DTM8 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf20Q5DTM8 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf20Q5DTM8 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf20Q5DTM8 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf20Q5DTM8 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf20Q5DTM8 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf20Q5DTM8 Gm4782-201ENSMUST00000168705 2046 ntBASIC16.09■□□□□ 0.17
Rnf20Q5DTM8 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Rnf20Q5DTM8 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf20Q5DTM8 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf20Q5DTM8 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf20Q5DTM8 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf20Q5DTM8 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf20Q5DTM8 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf20Q5DTM8 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC16.08■□□□□ 0.17
Rnf20Q5DTM8 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Rnf20Q5DTM8 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rnf20Q5DTM8 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
Rnf20Q5DTM8 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf20Q5DTM8 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf20Q5DTM8 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf20Q5DTM8 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf20Q5DTM8 Gm22189-201ENSMUST00000103822 86 ntBASIC16.08■□□□□ 0.16
Rnf20Q5DTM8 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf20Q5DTM8 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
Rnf20Q5DTM8 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC16.08■□□□□ 0.16
Rnf20Q5DTM8 Gm45195-201ENSMUST00000205597 1008 ntBASIC16.08■□□□□ 0.16
Rnf20Q5DTM8 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Rnf20Q5DTM8 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC16.08■□□□□ 0.16
Rnf20Q5DTM8 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf20Q5DTM8 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf20Q5DTM8 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf20Q5DTM8 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf20Q5DTM8 Gm3365-201ENSMUST00000216296 1480 ntBASIC16.08■□□□□ 0.16
Rnf20Q5DTM8 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf20Q5DTM8 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf20Q5DTM8 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf20Q5DTM8 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf20Q5DTM8 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf20Q5DTM8 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf20Q5DTM8 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf20Q5DTM8 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf20Q5DTM8 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf20Q5DTM8 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf20Q5DTM8 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rnf20Q5DTM8 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Rnf20Q5DTM8 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf20Q5DTM8 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf20Q5DTM8 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Rnf20Q5DTM8 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf20Q5DTM8 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf20Q5DTM8 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf20Q5DTM8 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf20Q5DTM8 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf20Q5DTM8 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Rnf20Q5DTM8 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
Rnf20Q5DTM8 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf20Q5DTM8 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf20Q5DTM8 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Rnf20Q5DTM8 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf20Q5DTM8 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
Rnf20Q5DTM8 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf20Q5DTM8 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf20Q5DTM8 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf20Q5DTM8 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf20Q5DTM8 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC16.07■□□□□ 0.16
Rnf20Q5DTM8 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Rnf20Q5DTM8 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC16.07■□□□□ 0.16
Rnf20Q5DTM8 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC16.07■□□□□ 0.16
Rnf20Q5DTM8 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf20Q5DTM8 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf20Q5DTM8 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Rnf20Q5DTM8 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Rnf20Q5DTM8 Gm43094-201ENSMUST00000196549 921 ntBASIC16.07■□□□□ 0.16
Rnf20Q5DTM8 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf20Q5DTM8 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC16.07■□□□□ 0.16
Rnf20Q5DTM8 Gm5161-201ENSMUST00000075243 853 ntBASIC16.07■□□□□ 0.16
Rnf20Q5DTM8 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf20Q5DTM8 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf20Q5DTM8 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf20Q5DTM8 Gm28386-201ENSMUST00000189147 1849 ntBASIC16.07■□□□□ 0.16
Rnf20Q5DTM8 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf20Q5DTM8 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf20Q5DTM8 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf20Q5DTM8 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf20Q5DTM8 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf20Q5DTM8 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf20Q5DTM8 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf20Q5DTM8 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf20Q5DTM8 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf20Q5DTM8 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Rnf20Q5DTM8 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Rnf20Q5DTM8 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf20Q5DTM8 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf20Q5DTM8 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Rnf20Q5DTM8 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf20Q5DTM8 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms