Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Cks1brtQ3UNC9 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cks1brtQ3UNC9 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cks1brtQ3UNC9 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cks1brtQ3UNC9 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cks1brtQ3UNC9 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cks1brtQ3UNC9 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Cks1brtQ3UNC9 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC9.67□□□□□ -0.86
Cks1brtQ3UNC9 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Cks1brtQ3UNC9 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC9.67□□□□□ -0.86
Cks1brtQ3UNC9 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC9.67□□□□□ -0.86
Cks1brtQ3UNC9 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Cks1brtQ3UNC9 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cks1brtQ3UNC9 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC9.67□□□□□ -0.86
Cks1brtQ3UNC9 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC9.67□□□□□ -0.86
Cks1brtQ3UNC9 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cks1brtQ3UNC9 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cks1brtQ3UNC9 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Cks1brtQ3UNC9 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
Cks1brtQ3UNC9 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cks1brtQ3UNC9 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC9.67□□□□□ -0.86
Cks1brtQ3UNC9 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Cks1brtQ3UNC9 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC9.67□□□□□ -0.86
Cks1brtQ3UNC9 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC9.67□□□□□ -0.86
Cks1brtQ3UNC9 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cks1brtQ3UNC9 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cks1brtQ3UNC9 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cks1brtQ3UNC9 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC9.67□□□□□ -0.86
Cks1brtQ3UNC9 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC9.67□□□□□ -0.86
Cks1brtQ3UNC9 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cks1brtQ3UNC9 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cks1brtQ3UNC9 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Cks1brtQ3UNC9 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cks1brtQ3UNC9 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cks1brtQ3UNC9 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cks1brtQ3UNC9 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cks1brtQ3UNC9 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cks1brtQ3UNC9 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Cks1brtQ3UNC9 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Cks1brtQ3UNC9 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cks1brtQ3UNC9 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Cks1brtQ3UNC9 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Cks1brtQ3UNC9 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cks1brtQ3UNC9 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Cks1brtQ3UNC9 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC9.66□□□□□ -0.86
Cks1brtQ3UNC9 Gm9109-201ENSMUST00000120254 1405 ntBASIC9.66□□□□□ -0.86
Cks1brtQ3UNC9 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cks1brtQ3UNC9 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Cks1brtQ3UNC9 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cks1brtQ3UNC9 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cks1brtQ3UNC9 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cks1brtQ3UNC9 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Cks1brtQ3UNC9 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Cks1brtQ3UNC9 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cks1brtQ3UNC9 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cks1brtQ3UNC9 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cks1brtQ3UNC9 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cks1brtQ3UNC9 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cks1brtQ3UNC9 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Cks1brtQ3UNC9 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cks1brtQ3UNC9 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cks1brtQ3UNC9 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Cks1brtQ3UNC9 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Cks1brtQ3UNC9 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Cks1brtQ3UNC9 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Cks1brtQ3UNC9 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC9.66□□□□□ -0.86
Cks1brtQ3UNC9 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cks1brtQ3UNC9 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Cks1brtQ3UNC9 Gm7787-201ENSMUST00000216858 688 ntBASIC9.66□□□□□ -0.86
Cks1brtQ3UNC9 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Cks1brtQ3UNC9 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cks1brtQ3UNC9 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Cks1brtQ3UNC9 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cks1brtQ3UNC9 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC9.66□□□□□ -0.86
Cks1brtQ3UNC9 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cks1brtQ3UNC9 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Cks1brtQ3UNC9 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cks1brtQ3UNC9 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cks1brtQ3UNC9 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cks1brtQ3UNC9 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cks1brtQ3UNC9 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cks1brtQ3UNC9 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Cks1brtQ3UNC9 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cks1brtQ3UNC9 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC9.66□□□□□ -0.86
Cks1brtQ3UNC9 AC154725.1-201ENSMUST00000224826 1961 ntBASIC9.66□□□□□ -0.86
Cks1brtQ3UNC9 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC9.66□□□□□ -0.86
Cks1brtQ3UNC9 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cks1brtQ3UNC9 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC9.66□□□□□ -0.86
Cks1brtQ3UNC9 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC9.66□□□□□ -0.86
Cks1brtQ3UNC9 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cks1brtQ3UNC9 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Cks1brtQ3UNC9 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Cks1brtQ3UNC9 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Cks1brtQ3UNC9 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Cks1brtQ3UNC9 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms