Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Gm45770-201ENSMUST00000212105 616 ntBASIC15.81■□□□□ 0.12
Col5a2Q3U962 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col5a2Q3U962 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Col5a2Q3U962 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col5a2Q3U962 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col5a2Q3U962 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Col5a2Q3U962 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col5a2Q3U962 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
Col5a2Q3U962 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col5a2Q3U962 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Col5a2Q3U962 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Col5a2Q3U962 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col5a2Q3U962 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col5a2Q3U962 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col5a2Q3U962 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col5a2Q3U962 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col5a2Q3U962 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col5a2Q3U962 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Col5a2Q3U962 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col5a2Q3U962 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Col5a2Q3U962 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Col5a2Q3U962 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col5a2Q3U962 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col5a2Q3U962 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Col5a2Q3U962 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col5a2Q3U962 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Col5a2Q3U962 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
Col5a2Q3U962 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
Col5a2Q3U962 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC15.8■□□□□ 0.12
Col5a2Q3U962 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Col5a2Q3U962 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Col5a2Q3U962 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Col5a2Q3U962 Gm27046-201ENSMUST00000182160 463 ntBASIC15.8■□□□□ 0.12
Col5a2Q3U962 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Col5a2Q3U962 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Col5a2Q3U962 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col5a2Q3U962 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col5a2Q3U962 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col5a2Q3U962 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Col5a2Q3U962 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Col5a2Q3U962 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col5a2Q3U962 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col5a2Q3U962 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col5a2Q3U962 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Col5a2Q3U962 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col5a2Q3U962 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col5a2Q3U962 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col5a2Q3U962 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col5a2Q3U962 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col5a2Q3U962 Gm12616-201ENSMUST00000118594 382 ntBASIC15.79■□□□□ 0.12
Col5a2Q3U962 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col5a2Q3U962 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Col5a2Q3U962 Gm12624-201ENSMUST00000177615 382 ntBASIC15.79■□□□□ 0.12
Col5a2Q3U962 Gm12621-201ENSMUST00000177760 382 ntBASIC15.79■□□□□ 0.12
Col5a2Q3U962 Gm12615-201ENSMUST00000177970 382 ntBASIC15.79■□□□□ 0.12
Col5a2Q3U962 Gm12622-201ENSMUST00000177975 382 ntBASIC15.79■□□□□ 0.12
Col5a2Q3U962 Gm12627-201ENSMUST00000178412 382 ntBASIC15.79■□□□□ 0.12
Col5a2Q3U962 Gm12625-201ENSMUST00000179122 382 ntBASIC15.79■□□□□ 0.12
Col5a2Q3U962 Gm12614-201ENSMUST00000179586 382 ntBASIC15.79■□□□□ 0.12
Col5a2Q3U962 Gm12613-201ENSMUST00000180323 382 ntBASIC15.79■□□□□ 0.12
Col5a2Q3U962 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col5a2Q3U962 AU022133-201ENSMUST00000200601 873 ntBASIC15.79■□□□□ 0.12
Col5a2Q3U962 Gm5051-201ENSMUST00000204085 485 ntBASIC15.79■□□□□ 0.12
Col5a2Q3U962 Gm44262-201ENSMUST00000204969 372 ntBASIC15.79■□□□□ 0.12
Col5a2Q3U962 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC15.79■□□□□ 0.12
Col5a2Q3U962 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC15.79■□□□□ 0.12
Col5a2Q3U962 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col5a2Q3U962 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col5a2Q3U962 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col5a2Q3U962 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col5a2Q3U962 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Col5a2Q3U962 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
Col5a2Q3U962 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Col5a2Q3U962 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC15.79■□□□□ 0.12
Col5a2Q3U962 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col5a2Q3U962 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col5a2Q3U962 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.79■□□□□ 0.12
Col5a2Q3U962 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Col5a2Q3U962 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col5a2Q3U962 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC15.78■□□□□ 0.12
Col5a2Q3U962 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC15.78■□□□□ 0.12
Col5a2Q3U962 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col5a2Q3U962 Gm25700-201ENSMUST00000177693 110 ntBASIC15.78■□□□□ 0.12
Col5a2Q3U962 Gm8856-201ENSMUST00000185254 1144 ntBASIC15.78■□□□□ 0.12
Col5a2Q3U962 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC15.78■□□□□ 0.12
Col5a2Q3U962 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col5a2Q3U962 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col5a2Q3U962 Gm37737-201ENSMUST00000195013 1638 ntBASIC15.78■□□□□ 0.12
Col5a2Q3U962 Gm26513-201ENSMUST00000181802 2489 ntBASIC15.78■□□□□ 0.12
Col5a2Q3U962 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col5a2Q3U962 Gm43205-201ENSMUST00000198622 1968 ntBASIC15.78■□□□□ 0.12
Col5a2Q3U962 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC15.78■□□□□ 0.12
Col5a2Q3U962 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col5a2Q3U962 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col5a2Q3U962 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col5a2Q3U962 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col5a2Q3U962 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col5a2Q3U962 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Col5a2Q3U962 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Col5a2Q3U962 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms