Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.28□□□□□ -0.28
Sox4Q06831 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox4Q06831 Gm15371-201ENSMUST00000117057 784 ntBASIC13.28□□□□□ -0.28
Sox4Q06831 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.28□□□□□ -0.28
Sox4Q06831 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sox4Q06831 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox4Q06831 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sox4Q06831 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.28□□□□□ -0.28
Sox4Q06831 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.28□□□□□ -0.28
Sox4Q06831 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox4Q06831 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sox4Q06831 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox4Q06831 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox4Q06831 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox4Q06831 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Sox4Q06831 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox4Q06831 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.28□□□□□ -0.28
Sox4Q06831 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.28□□□□□ -0.28
Sox4Q06831 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox4Q06831 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox4Q06831 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox4Q06831 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox4Q06831 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.28□□□□□ -0.28
Sox4Q06831 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox4Q06831 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.28□□□□□ -0.28
Sox4Q06831 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sox4Q06831 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.28□□□□□ -0.28
Sox4Q06831 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sox4Q06831 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.28□□□□□ -0.28
Sox4Q06831 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.28□□□□□ -0.28
Sox4Q06831 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Sox4Q06831 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.27□□□□□ -0.28
Sox4Q06831 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
Sox4Q06831 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sox4Q06831 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.27□□□□□ -0.28
Sox4Q06831 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Sox4Q06831 Gm12928-201ENSMUST00000117115 573 ntBASIC13.27□□□□□ -0.29
Sox4Q06831 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.27□□□□□ -0.29
Sox4Q06831 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Sox4Q06831 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.27□□□□□ -0.29
Sox4Q06831 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox4Q06831 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Sox4Q06831 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
Sox4Q06831 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.27□□□□□ -0.29
Sox4Q06831 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sox4Q06831 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sox4Q06831 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox4Q06831 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox4Q06831 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox4Q06831 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.27□□□□□ -0.29
Sox4Q06831 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.27□□□□□ -0.29
Sox4Q06831 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sox4Q06831 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox4Q06831 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox4Q06831 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sox4Q06831 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Sox4Q06831 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox4Q06831 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Sox4Q06831 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox4Q06831 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox4Q06831 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox4Q06831 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Sox4Q06831 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Sox4Q06831 Gm11478-201ENSMUST00000117851 599 ntBASIC13.26□□□□□ -0.29
Sox4Q06831 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox4Q06831 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox4Q06831 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.26□□□□□ -0.29
Sox4Q06831 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sox4Q06831 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox4Q06831 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox4Q06831 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.26□□□□□ -0.29
Sox4Q06831 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Sox4Q06831 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.26□□□□□ -0.29
Sox4Q06831 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sox4Q06831 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sox4Q06831 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox4Q06831 Gm38144-201ENSMUST00000192790 465 ntBASIC13.26□□□□□ -0.29
Sox4Q06831 Gm8463-201ENSMUST00000208573 613 ntBASIC13.26□□□□□ -0.29
Sox4Q06831 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox4Q06831 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox4Q06831 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.26□□□□□ -0.29
Sox4Q06831 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox4Q06831 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox4Q06831 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Sox4Q06831 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Sox4Q06831 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox4Q06831 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox4Q06831 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox4Q06831 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox4Q06831 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Sox4Q06831 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox4Q06831 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox4Q06831 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox4Q06831 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sox4Q06831 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sox4Q06831 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Sox4Q06831 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.25□□□□□ -0.29
Sox4Q06831 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sox4Q06831 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sox4Q06831 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms