Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rpl39P62892 Gm42934-201ENSMUST00000196920 1345 ntBASIC9.61□□□□□ -0.87
Rpl39P62892 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Rpl39P62892 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rpl39P62892 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC9.61□□□□□ -0.87
Rpl39P62892 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC9.61□□□□□ -0.87
Rpl39P62892 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Rpl39P62892 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rpl39P62892 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC9.61□□□□□ -0.87
Rpl39P62892 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rpl39P62892 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rpl39P62892 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rpl39P62892 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Rpl39P62892 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Rpl39P62892 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Rpl39P62892 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rpl39P62892 Gm6226-201ENSMUST00000117765 1146 ntBASIC9.61□□□□□ -0.87
Rpl39P62892 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC9.61□□□□□ -0.87
Rpl39P62892 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Rpl39P62892 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC9.61□□□□□ -0.87
Rpl39P62892 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Rpl39P62892 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rpl39P62892 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Rpl39P62892 AA619741-201ENSMUST00000195095 646 ntBASIC9.61□□□□□ -0.87
Rpl39P62892 Gm44492-201ENSMUST00000197012 141 ntBASIC9.61□□□□□ -0.87
Rpl39P62892 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC9.61□□□□□ -0.87
Rpl39P62892 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC9.61□□□□□ -0.87
Rpl39P62892 AC159295.1-201ENSMUST00000225326 940 ntBASIC9.61□□□□□ -0.87
Rpl39P62892 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rpl39P62892 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rpl39P62892 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Rpl39P62892 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rpl39P62892 Syt7-205ENSMUST00000224135 1557 ntBASIC9.61□□□□□ -0.87
Rpl39P62892 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rpl39P62892 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Rpl39P62892 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rpl39P62892 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Rpl39P62892 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rpl39P62892 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Rpl39P62892 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rpl39P62892 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rpl39P62892 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rpl39P62892 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rpl39P62892 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC9.61□□□□□ -0.87
Rpl39P62892 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Rpl39P62892 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rpl39P62892 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rpl39P62892 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rpl39P62892 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rpl39P62892 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC9.6□□□□□ -0.87
Rpl39P62892 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rpl39P62892 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Rpl39P62892 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Rpl39P62892 AC159196.2-201ENSMUST00000224082 1622 ntBASIC9.6□□□□□ -0.87
Rpl39P62892 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rpl39P62892 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC9.6□□□□□ -0.87
Rpl39P62892 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rpl39P62892 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rpl39P62892 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Rpl39P62892 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Rpl39P62892 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rpl39P62892 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rpl39P62892 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rpl39P62892 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC9.6□□□□□ -0.87
Rpl39P62892 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Rpl39P62892 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rpl39P62892 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Rpl39P62892 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rpl39P62892 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rpl39P62892 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rpl39P62892 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rpl39P62892 Gm5385-201ENSMUST00000118988 1559 ntBASIC9.6□□□□□ -0.87
Rpl39P62892 Gm45751-201ENSMUST00000210185 1573 ntBASIC9.6□□□□□ -0.87
Rpl39P62892 AC114543.1-201ENSMUST00000226451 1558 ntBASIC9.6□□□□□ -0.87
Rpl39P62892 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rpl39P62892 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rpl39P62892 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Rpl39P62892 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rpl39P62892 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rpl39P62892 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rpl39P62892 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rpl39P62892 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rpl39P62892 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rpl39P62892 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC9.6□□□□□ -0.87
Rpl39P62892 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rpl39P62892 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Rpl39P62892 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC9.6□□□□□ -0.87
Rpl39P62892 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Rpl39P62892 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC9.6□□□□□ -0.87
Rpl39P62892 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC9.6□□□□□ -0.87
Rpl39P62892 AC166341.4-201ENSMUST00000220625 123 ntBASIC9.6□□□□□ -0.87
Rpl39P62892 AC149588.3-201ENSMUST00000227515 150 ntBASIC9.6□□□□□ -0.87
Rpl39P62892 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rpl39P62892 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rpl39P62892 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Rpl39P62892 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rpl39P62892 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Rpl39P62892 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC9.6□□□□□ -0.87
Rpl39P62892 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rpl39P62892 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms