Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tubgcp3P58854 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tubgcp3P58854 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tubgcp3P58854 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.81□□□□□ -0.2
Tubgcp3P58854 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tubgcp3P58854 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.81□□□□□ -0.2
Tubgcp3P58854 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tubgcp3P58854 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tubgcp3P58854 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tubgcp3P58854 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tubgcp3P58854 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Tubgcp3P58854 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tubgcp3P58854 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tubgcp3P58854 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Tubgcp3P58854 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Tubgcp3P58854 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.8□□□□□ -0.2
Tubgcp3P58854 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tubgcp3P58854 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tubgcp3P58854 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.8□□□□□ -0.2
Tubgcp3P58854 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Tubgcp3P58854 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Tubgcp3P58854 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tubgcp3P58854 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.8□□□□□ -0.2
Tubgcp3P58854 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tubgcp3P58854 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tubgcp3P58854 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tubgcp3P58854 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tubgcp3P58854 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.8□□□□□ -0.2
Tubgcp3P58854 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Tubgcp3P58854 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Tubgcp3P58854 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tubgcp3P58854 Mir7684-201ENSMUST00000183858 60 ntBASIC13.8□□□□□ -0.2
Tubgcp3P58854 Gm27838-201ENSMUST00000184829 128 ntBASIC13.8□□□□□ -0.2
Tubgcp3P58854 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Tubgcp3P58854 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.8□□□□□ -0.2
Tubgcp3P58854 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Tubgcp3P58854 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.8□□□□□ -0.2
Tubgcp3P58854 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.8□□□□□ -0.2
Tubgcp3P58854 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Tubgcp3P58854 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tubgcp3P58854 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tubgcp3P58854 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tubgcp3P58854 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.8□□□□□ -0.2
Tubgcp3P58854 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.8□□□□□ -0.2
Tubgcp3P58854 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Tubgcp3P58854 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tubgcp3P58854 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tubgcp3P58854 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tubgcp3P58854 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tubgcp3P58854 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Tubgcp3P58854 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tubgcp3P58854 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.8□□□□□ -0.2
Tubgcp3P58854 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tubgcp3P58854 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tubgcp3P58854 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tubgcp3P58854 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tubgcp3P58854 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Tubgcp3P58854 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tubgcp3P58854 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tubgcp3P58854 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tubgcp3P58854 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tubgcp3P58854 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tubgcp3P58854 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Tubgcp3P58854 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tubgcp3P58854 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tubgcp3P58854 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tubgcp3P58854 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Tubgcp3P58854 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.79□□□□□ -0.2
Tubgcp3P58854 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tubgcp3P58854 Gm15770-201ENSMUST00000117498 584 ntBASIC13.79□□□□□ -0.2
Tubgcp3P58854 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Tubgcp3P58854 Gm29667-201ENSMUST00000190817 490 ntBASIC13.79□□□□□ -0.2
Tubgcp3P58854 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tubgcp3P58854 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.79□□□□□ -0.2
Tubgcp3P58854 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tubgcp3P58854 Gm20445-201ENSMUST00000061905 565 ntBASIC13.79□□□□□ -0.2
Tubgcp3P58854 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Tubgcp3P58854 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.79□□□□□ -0.2
Tubgcp3P58854 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.79□□□□□ -0.2
Tubgcp3P58854 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Tubgcp3P58854 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tubgcp3P58854 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tubgcp3P58854 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tubgcp3P58854 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tubgcp3P58854 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tubgcp3P58854 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Tubgcp3P58854 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tubgcp3P58854 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.79□□□□□ -0.2
Tubgcp3P58854 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tubgcp3P58854 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tubgcp3P58854 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tubgcp3P58854 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tubgcp3P58854 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tubgcp3P58854 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tubgcp3P58854 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Tubgcp3P58854 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tubgcp3P58854 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tubgcp3P58854 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.78□□□□□ -0.2
Tubgcp3P58854 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Tubgcp3P58854 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms