Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.84□□□□□ -0.19
SftpbP50405 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.84□□□□□ -0.19
SftpbP50405 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SftpbP50405 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.84□□□□□ -0.19
SftpbP50405 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.84□□□□□ -0.19
SftpbP50405 Gm9229-201ENSMUST00000222777 126 ntBASIC13.84□□□□□ -0.19
SftpbP50405 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SftpbP50405 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SftpbP50405 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SftpbP50405 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SftpbP50405 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SftpbP50405 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SftpbP50405 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SftpbP50405 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SftpbP50405 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SftpbP50405 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SftpbP50405 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SftpbP50405 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
SftpbP50405 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
SftpbP50405 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.83□□□□□ -0.19
SftpbP50405 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.19
SftpbP50405 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SftpbP50405 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
SftpbP50405 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
SftpbP50405 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SftpbP50405 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SftpbP50405 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SftpbP50405 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SftpbP50405 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SftpbP50405 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SftpbP50405 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.83□□□□□ -0.2
SftpbP50405 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SftpbP50405 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SftpbP50405 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.83□□□□□ -0.2
SftpbP50405 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SftpbP50405 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SftpbP50405 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
SftpbP50405 Gm15693-201ENSMUST00000120470 637 ntBASIC13.83□□□□□ -0.2
SftpbP50405 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SftpbP50405 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SftpbP50405 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.83□□□□□ -0.2
SftpbP50405 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SftpbP50405 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SftpbP50405 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.83□□□□□ -0.2
SftpbP50405 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
SftpbP50405 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
SftpbP50405 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SftpbP50405 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SftpbP50405 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
SftpbP50405 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SftpbP50405 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SftpbP50405 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SftpbP50405 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SftpbP50405 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SftpbP50405 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SftpbP50405 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SftpbP50405 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
SftpbP50405 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SftpbP50405 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SftpbP50405 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SftpbP50405 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SftpbP50405 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SftpbP50405 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.82□□□□□ -0.2
SftpbP50405 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SftpbP50405 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SftpbP50405 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.82□□□□□ -0.2
SftpbP50405 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SftpbP50405 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.82□□□□□ -0.2
SftpbP50405 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SftpbP50405 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SftpbP50405 Gm13385-201ENSMUST00000121089 220 ntBASIC13.82□□□□□ -0.2
SftpbP50405 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
SftpbP50405 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SftpbP50405 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.82□□□□□ -0.2
SftpbP50405 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SftpbP50405 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SftpbP50405 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SftpbP50405 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
SftpbP50405 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
SftpbP50405 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SftpbP50405 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SftpbP50405 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
SftpbP50405 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
SftpbP50405 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SftpbP50405 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SftpbP50405 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SftpbP50405 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SftpbP50405 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SftpbP50405 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SftpbP50405 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.82□□□□□ -0.2
SftpbP50405 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SftpbP50405 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SftpbP50405 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SftpbP50405 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SftpbP50405 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SftpbP50405 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
SftpbP50405 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
SftpbP50405 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SftpbP50405 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SftpbP50405 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms