Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Gm9719-201ENSMUST00000162765 543 ntBASIC11.16□□□□□ -0.62
Hist1h1aP43275 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hist1h1aP43275 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Hist1h1aP43275 Gm37714-201ENSMUST00000194742 342 ntBASIC11.16□□□□□ -0.62
Hist1h1aP43275 Gm43125-201ENSMUST00000201724 730 ntBASIC11.16□□□□□ -0.62
Hist1h1aP43275 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC11.16□□□□□ -0.62
Hist1h1aP43275 AW822252-206ENSMUST00000208904 237 ntBASIC11.16□□□□□ -0.62
Hist1h1aP43275 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC11.16□□□□□ -0.62
Hist1h1aP43275 AC149294.4-201ENSMUST00000227870 882 ntBASIC11.16□□□□□ -0.62
Hist1h1aP43275 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hist1h1aP43275 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hist1h1aP43275 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hist1h1aP43275 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Hist1h1aP43275 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC11.16□□□□□ -0.62
Hist1h1aP43275 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hist1h1aP43275 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hist1h1aP43275 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Hist1h1aP43275 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hist1h1aP43275 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Hist1h1aP43275 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Hist1h1aP43275 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hist1h1aP43275 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Hist1h1aP43275 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Hist1h1aP43275 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC11.16□□□□□ -0.62
Hist1h1aP43275 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.16□□□□□ -0.62
Hist1h1aP43275 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.16□□□□□ -0.62
Hist1h1aP43275 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.16□□□□□ -0.62
Hist1h1aP43275 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Hist1h1aP43275 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
Hist1h1aP43275 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hist1h1aP43275 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Hist1h1aP43275 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hist1h1aP43275 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Hist1h1aP43275 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hist1h1aP43275 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hist1h1aP43275 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Hist1h1aP43275 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hist1h1aP43275 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Hist1h1aP43275 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hist1h1aP43275 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC11.15□□□□□ -0.62
Hist1h1aP43275 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hist1h1aP43275 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Hist1h1aP43275 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hist1h1aP43275 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hist1h1aP43275 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hist1h1aP43275 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC11.15□□□□□ -0.62
Hist1h1aP43275 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC11.15□□□□□ -0.62
Hist1h1aP43275 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Hist1h1aP43275 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC11.15□□□□□ -0.62
Hist1h1aP43275 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC11.15□□□□□ -0.62
Hist1h1aP43275 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC11.15□□□□□ -0.62
Hist1h1aP43275 Mir6990-201ENSMUST00000183724 91 ntBASIC11.15□□□□□ -0.62
Hist1h1aP43275 Gm27525-201ENSMUST00000184465 107 ntBASIC11.15□□□□□ -0.62
Hist1h1aP43275 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hist1h1aP43275 Gm6443-201ENSMUST00000203599 874 ntBASIC11.15□□□□□ -0.62
Hist1h1aP43275 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Hist1h1aP43275 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hist1h1aP43275 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hist1h1aP43275 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Hist1h1aP43275 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hist1h1aP43275 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hist1h1aP43275 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hist1h1aP43275 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Hist1h1aP43275 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hist1h1aP43275 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hist1h1aP43275 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Hist1h1aP43275 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Hist1h1aP43275 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
Hist1h1aP43275 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.15□□□□□ -0.63
Hist1h1aP43275 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
Hist1h1aP43275 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Hist1h1aP43275 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Hist1h1aP43275 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
Hist1h1aP43275 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Hist1h1aP43275 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hist1h1aP43275 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hist1h1aP43275 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hist1h1aP43275 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Hist1h1aP43275 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hist1h1aP43275 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hist1h1aP43275 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC11.14□□□□□ -0.63
Hist1h1aP43275 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hist1h1aP43275 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Hist1h1aP43275 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hist1h1aP43275 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Hist1h1aP43275 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hist1h1aP43275 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Hist1h1aP43275 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hist1h1aP43275 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Hist1h1aP43275 Gm18766-201ENSMUST00000189811 808 ntBASIC11.14□□□□□ -0.63
Hist1h1aP43275 Ighv1-25-201ENSMUST00000195638 345 ntBASIC11.14□□□□□ -0.63
Hist1h1aP43275 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC11.14□□□□□ -0.63
Hist1h1aP43275 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Hist1h1aP43275 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hist1h1aP43275 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hist1h1aP43275 AC090659.2-201ENSMUST00000225378 1186 ntBASIC11.14□□□□□ -0.63
Hist1h1aP43275 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hist1h1aP43275 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Hist1h1aP43275 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hist1h1aP43275 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms