Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.32□□□□□ -0.6
Hmx3P42581 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmx3P42581 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hmx3P42581 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmx3P42581 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmx3P42581 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmx3P42581 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hmx3P42581 Gm11779-201ENSMUST00000118541 368 ntBASIC11.32□□□□□ -0.6
Hmx3P42581 Gm14494-201ENSMUST00000118786 435 ntBASIC11.32□□□□□ -0.6
Hmx3P42581 Gm15467-201ENSMUST00000120582 445 ntBASIC11.32□□□□□ -0.6
Hmx3P42581 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Hmx3P42581 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hmx3P42581 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC11.32□□□□□ -0.6
Hmx3P42581 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC11.32□□□□□ -0.6
Hmx3P42581 AW822252-206ENSMUST00000208904 237 ntBASIC11.32□□□□□ -0.6
Hmx3P42581 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC11.32□□□□□ -0.6
Hmx3P42581 AC155729.1-201ENSMUST00000227758 544 ntBASIC11.32□□□□□ -0.6
Hmx3P42581 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Hmx3P42581 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Hmx3P42581 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmx3P42581 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.32□□□□□ -0.6
Hmx3P42581 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmx3P42581 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hmx3P42581 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmx3P42581 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmx3P42581 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hmx3P42581 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmx3P42581 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Hmx3P42581 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmx3P42581 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Hmx3P42581 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmx3P42581 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hmx3P42581 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmx3P42581 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmx3P42581 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmx3P42581 Gm9252-201ENSMUST00000172364 1602 ntBASIC11.31□□□□□ -0.6
Hmx3P42581 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hmx3P42581 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmx3P42581 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
Hmx3P42581 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Hmx3P42581 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmx3P42581 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmx3P42581 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmx3P42581 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.31□□□□□ -0.6
Hmx3P42581 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmx3P42581 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmx3P42581 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmx3P42581 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Hmx3P42581 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Hmx3P42581 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hmx3P42581 Gm5479-201ENSMUST00000160578 435 ntBASIC11.31□□□□□ -0.6
Hmx3P42581 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Hmx3P42581 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hmx3P42581 Gm45683-201ENSMUST00000210825 1247 ntBASIC11.31□□□□□ -0.6
Hmx3P42581 AC154595.3-201ENSMUST00000224579 384 ntBASIC11.31□□□□□ -0.6
Hmx3P42581 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmx3P42581 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Hmx3P42581 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Hmx3P42581 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmx3P42581 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmx3P42581 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmx3P42581 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmx3P42581 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC11.31□□□□□ -0.6
Hmx3P42581 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hmx3P42581 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmx3P42581 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmx3P42581 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmx3P42581 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hmx3P42581 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Hmx3P42581 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Hmx3P42581 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Hmx3P42581 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmx3P42581 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmx3P42581 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmx3P42581 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmx3P42581 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hmx3P42581 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmx3P42581 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmx3P42581 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Hmx3P42581 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmx3P42581 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hmx3P42581 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmx3P42581 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.3□□□□□ -0.6
Hmx3P42581 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hmx3P42581 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmx3P42581 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmx3P42581 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmx3P42581 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.3□□□□□ -0.6
Hmx3P42581 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmx3P42581 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmx3P42581 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.3□□□□□ -0.6
Hmx3P42581 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmx3P42581 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmx3P42581 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hmx3P42581 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmx3P42581 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmx3P42581 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmx3P42581 Gm14042-201ENSMUST00000120139 833 ntBASIC11.3□□□□□ -0.6
Hmx3P42581 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC11.3□□□□□ -0.6
Hmx3P42581 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms