Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Mir497b-201ENSMUST00000093601 125 ntBASIC13.48□□□□□ -0.25
LdlrP35951 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.48□□□□□ -0.25
LdlrP35951 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LdlrP35951 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
LdlrP35951 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
LdlrP35951 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
LdlrP35951 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
LdlrP35951 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LdlrP35951 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LdlrP35951 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LdlrP35951 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LdlrP35951 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LdlrP35951 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
LdlrP35951 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.48□□□□□ -0.25
LdlrP35951 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LdlrP35951 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LdlrP35951 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
LdlrP35951 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
LdlrP35951 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LdlrP35951 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LdlrP35951 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LdlrP35951 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
LdlrP35951 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LdlrP35951 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.47□□□□□ -0.25
LdlrP35951 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
LdlrP35951 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.47□□□□□ -0.25
LdlrP35951 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
LdlrP35951 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.47□□□□□ -0.25
LdlrP35951 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.47□□□□□ -0.25
LdlrP35951 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.47□□□□□ -0.25
LdlrP35951 Gm18187-201ENSMUST00000196476 984 ntBASIC13.47□□□□□ -0.25
LdlrP35951 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
LdlrP35951 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.47□□□□□ -0.25
LdlrP35951 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
LdlrP35951 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LdlrP35951 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
LdlrP35951 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LdlrP35951 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LdlrP35951 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LdlrP35951 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
LdlrP35951 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
LdlrP35951 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
LdlrP35951 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
LdlrP35951 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
LdlrP35951 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LdlrP35951 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LdlrP35951 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LdlrP35951 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.47□□□□□ -0.25
LdlrP35951 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LdlrP35951 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
LdlrP35951 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
LdlrP35951 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LdlrP35951 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
LdlrP35951 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
LdlrP35951 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
LdlrP35951 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LdlrP35951 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LdlrP35951 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LdlrP35951 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LdlrP35951 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
LdlrP35951 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
LdlrP35951 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.46□□□□□ -0.25
LdlrP35951 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LdlrP35951 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LdlrP35951 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
LdlrP35951 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LdlrP35951 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LdlrP35951 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LdlrP35951 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LdlrP35951 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.46□□□□□ -0.25
LdlrP35951 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LdlrP35951 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
LdlrP35951 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.46□□□□□ -0.25
LdlrP35951 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
LdlrP35951 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
LdlrP35951 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.46□□□□□ -0.25
LdlrP35951 Gm44344-201ENSMUST00000200287 129 ntBASIC13.46□□□□□ -0.25
LdlrP35951 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.46□□□□□ -0.25
LdlrP35951 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LdlrP35951 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LdlrP35951 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
LdlrP35951 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LdlrP35951 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LdlrP35951 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
LdlrP35951 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LdlrP35951 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.46□□□□□ -0.26
LdlrP35951 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
LdlrP35951 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LdlrP35951 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.45□□□□□ -0.26
LdlrP35951 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
LdlrP35951 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
LdlrP35951 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
LdlrP35951 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LdlrP35951 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LdlrP35951 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
LdlrP35951 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
LdlrP35951 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
LdlrP35951 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LdlrP35951 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LdlrP35951 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms