Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Mmp13P33435 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.85□□□□□ -0.19
Mmp13P33435 Gm27321-201ENSMUST00000185021 205 ntBASIC13.85□□□□□ -0.19
Mmp13P33435 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.85□□□□□ -0.19
Mmp13P33435 Gm6916-202ENSMUST00000205523 195 ntBASIC13.85□□□□□ -0.19
Mmp13P33435 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.85□□□□□ -0.19
Mmp13P33435 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Mmp13P33435 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.85□□□□□ -0.19
Mmp13P33435 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Mmp13P33435 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Mmp13P33435 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.85□□□□□ -0.19
Mmp13P33435 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Mmp13P33435 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Mmp13P33435 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Mmp13P33435 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Mmp13P33435 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Mmp13P33435 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Mmp13P33435 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Mmp13P33435 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Mmp13P33435 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
Mmp13P33435 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.85□□□□□ -0.19
Mmp13P33435 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Mmp13P33435 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Mmp13P33435 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Mmp13P33435 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Mmp13P33435 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Mmp13P33435 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Mmp13P33435 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Mmp13P33435 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Mmp13P33435 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Mmp13P33435 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Mmp13P33435 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Mmp13P33435 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.84□□□□□ -0.19
Mmp13P33435 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Mmp13P33435 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.84□□□□□ -0.19
Mmp13P33435 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.84□□□□□ -0.19
Mmp13P33435 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Mmp13P33435 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.84□□□□□ -0.19
Mmp13P33435 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.84□□□□□ -0.19
Mmp13P33435 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.84□□□□□ -0.19
Mmp13P33435 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Mmp13P33435 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Mmp13P33435 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Mmp13P33435 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Mmp13P33435 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Mmp13P33435 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Mmp13P33435 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Mmp13P33435 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Mmp13P33435 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
Mmp13P33435 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Mmp13P33435 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.84□□□□□ -0.19
Mmp13P33435 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Mmp13P33435 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Mmp13P33435 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Mmp13P33435 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Mmp13P33435 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Mmp13P33435 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Mmp13P33435 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Mmp13P33435 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Mmp13P33435 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Mmp13P33435 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Mmp13P33435 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Mmp13P33435 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Mmp13P33435 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Mmp13P33435 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.83□□□□□ -0.19
Mmp13P33435 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Mmp13P33435 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Mmp13P33435 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Mmp13P33435 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Mmp13P33435 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Mmp13P33435 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Mmp13P33435 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Mmp13P33435 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Mmp13P33435 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Mmp13P33435 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Mmp13P33435 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Mmp13P33435 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Mmp13P33435 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.83□□□□□ -0.2
Mmp13P33435 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Mmp13P33435 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Mmp13P33435 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.83□□□□□ -0.2
Mmp13P33435 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Mmp13P33435 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.83□□□□□ -0.2
Mmp13P33435 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Mmp13P33435 Gm33320-201ENSMUST00000192232 530 ntBASIC13.83□□□□□ -0.2
Mmp13P33435 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Mmp13P33435 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.83□□□□□ -0.2
Mmp13P33435 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.83□□□□□ -0.2
Mmp13P33435 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Mmp13P33435 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Mmp13P33435 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Mmp13P33435 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Mmp13P33435 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Mmp13P33435 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Mmp13P33435 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Mmp13P33435 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.83□□□□□ -0.2
Mmp13P33435 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.83□□□□□ -0.2
Mmp13P33435 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Mmp13P33435 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Mmp13P33435 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 126.8 ms