Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nedd8P29595 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nedd8P29595 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nedd8P29595 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.45□□□□□ -0.42
Nedd8P29595 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nedd8P29595 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nedd8P29595 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Nedd8P29595 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nedd8P29595 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nedd8P29595 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nedd8P29595 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nedd8P29595 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nedd8P29595 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nedd8P29595 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nedd8P29595 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nedd8P29595 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nedd8P29595 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Nedd8P29595 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nedd8P29595 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.44□□□□□ -0.42
Nedd8P29595 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.44□□□□□ -0.42
Nedd8P29595 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.44□□□□□ -0.42
Nedd8P29595 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Nedd8P29595 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Nedd8P29595 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Nedd8P29595 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.44□□□□□ -0.42
Nedd8P29595 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Nedd8P29595 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.44□□□□□ -0.42
Nedd8P29595 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nedd8P29595 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nedd8P29595 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nedd8P29595 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Nedd8P29595 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nedd8P29595 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Nedd8P29595 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nedd8P29595 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nedd8P29595 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nedd8P29595 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Nedd8P29595 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Nedd8P29595 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.44□□□□□ -0.42
Nedd8P29595 Gm44719-201ENSMUST00000206404 149 ntBASIC12.44□□□□□ -0.42
Nedd8P29595 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nedd8P29595 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC12.44□□□□□ -0.42
Nedd8P29595 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nedd8P29595 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nedd8P29595 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC12.44□□□□□ -0.42
Nedd8P29595 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nedd8P29595 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nedd8P29595 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Nedd8P29595 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nedd8P29595 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.44□□□□□ -0.42
Nedd8P29595 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nedd8P29595 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.44□□□□□ -0.42
Nedd8P29595 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nedd8P29595 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nedd8P29595 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nedd8P29595 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nedd8P29595 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nedd8P29595 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nedd8P29595 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nedd8P29595 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nedd8P29595 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nedd8P29595 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nedd8P29595 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nedd8P29595 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nedd8P29595 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nedd8P29595 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nedd8P29595 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nedd8P29595 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nedd8P29595 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nedd8P29595 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Nedd8P29595 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nedd8P29595 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nedd8P29595 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nedd8P29595 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nedd8P29595 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nedd8P29595 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Nedd8P29595 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Nedd8P29595 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nedd8P29595 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nedd8P29595 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nedd8P29595 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nedd8P29595 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nedd8P29595 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nedd8P29595 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC12.43□□□□□ -0.42
Nedd8P29595 Gm44357-201ENSMUST00000195897 142 ntBASIC12.43□□□□□ -0.42
Nedd8P29595 Gm19658-201ENSMUST00000196231 138 ntBASIC12.43□□□□□ -0.42
Nedd8P29595 Gm44367-201ENSMUST00000196836 138 ntBASIC12.43□□□□□ -0.42
Nedd8P29595 Gm44350-201ENSMUST00000197197 138 ntBASIC12.43□□□□□ -0.42
Nedd8P29595 Gm44390-201ENSMUST00000197533 144 ntBASIC12.43□□□□□ -0.42
Nedd8P29595 Gm44313-201ENSMUST00000198018 138 ntBASIC12.43□□□□□ -0.42
Nedd8P29595 Gm44486-201ENSMUST00000198508 138 ntBASIC12.43□□□□□ -0.42
Nedd8P29595 Gm44314-201ENSMUST00000199263 138 ntBASIC12.43□□□□□ -0.42
Nedd8P29595 Gm44394-201ENSMUST00000199558 138 ntBASIC12.43□□□□□ -0.42
Nedd8P29595 Gm44484-201ENSMUST00000199873 138 ntBASIC12.43□□□□□ -0.42
Nedd8P29595 Gm44466-201ENSMUST00000200264 138 ntBASIC12.43□□□□□ -0.42
Nedd8P29595 Gm44359-201ENSMUST00000200671 138 ntBASIC12.43□□□□□ -0.42
Nedd8P29595 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.43□□□□□ -0.42
Nedd8P29595 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nedd8P29595 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nedd8P29595 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms