Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl6P27784 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Ccl6P27784 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl6P27784 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl6P27784 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl6P27784 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl6P27784 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl6P27784 AC154262.2-201ENSMUST00000224310 2293 ntBASIC10.54□□□□□ -0.72
Ccl6P27784 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl6P27784 AC154747.3-201ENSMUST00000224471 3470 ntBASIC10.54□□□□□ -0.72
Ccl6P27784 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl6P27784 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl6P27784 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl6P27784 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl6P27784 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Ccl6P27784 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC10.54□□□□□ -0.72
Ccl6P27784 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl6P27784 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC10.54□□□□□ -0.72
Ccl6P27784 Gm4804-201ENSMUST00000182234 999 ntBASIC10.54□□□□□ -0.72
Ccl6P27784 Gm9522-201ENSMUST00000182394 926 ntBASIC10.54□□□□□ -0.72
Ccl6P27784 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl6P27784 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Ccl6P27784 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC10.54□□□□□ -0.72
Ccl6P27784 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC10.54□□□□□ -0.72
Ccl6P27784 Gm4971-201ENSMUST00000205991 1108 ntBASIC10.54□□□□□ -0.72
Ccl6P27784 Gm20949-201ENSMUST00000206478 952 ntBASIC10.54□□□□□ -0.72
Ccl6P27784 AC238811.1-201ENSMUST00000225302 441 ntBASIC10.54□□□□□ -0.72
Ccl6P27784 AC155298.2-201ENSMUST00000225485 6226 ntBASIC10.54□□□□□ -0.72
Ccl6P27784 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl6P27784 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl6P27784 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl6P27784 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl6P27784 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Ccl6P27784 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl6P27784 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Ccl6P27784 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
Ccl6P27784 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl6P27784 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl6P27784 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl6P27784 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl6P27784 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl6P27784 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl6P27784 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC10.54□□□□□ -0.72
Ccl6P27784 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl6P27784 Gm42690-201ENSMUST00000197921 1836 ntBASIC10.54□□□□□ -0.72
Ccl6P27784 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl6P27784 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC10.53□□□□□ -0.72
Ccl6P27784 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccl6P27784 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ccl6P27784 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ccl6P27784 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ccl6P27784 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccl6P27784 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccl6P27784 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccl6P27784 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccl6P27784 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccl6P27784 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccl6P27784 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ccl6P27784 Gm14752-201ENSMUST00000120719 2075 ntBASIC10.53□□□□□ -0.72
Ccl6P27784 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccl6P27784 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ccl6P27784 Gm37437-201ENSMUST00000194451 1937 ntBASIC10.53□□□□□ -0.72
Ccl6P27784 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccl6P27784 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccl6P27784 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccl6P27784 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccl6P27784 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccl6P27784 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccl6P27784 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Ccl6P27784 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccl6P27784 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccl6P27784 Gm15920-201ENSMUST00000118998 402 ntBASIC10.53□□□□□ -0.72
Ccl6P27784 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC10.53□□□□□ -0.72
Ccl6P27784 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC10.53□□□□□ -0.72
Ccl6P27784 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Ccl6P27784 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccl6P27784 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ccl6P27784 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC10.53□□□□□ -0.72
Ccl6P27784 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ccl6P27784 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccl6P27784 AC166997.1-201ENSMUST00000225122 572 ntBASIC10.53□□□□□ -0.72
Ccl6P27784 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccl6P27784 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccl6P27784 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccl6P27784 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC10.53□□□□□ -0.72
Ccl6P27784 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Ccl6P27784 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccl6P27784 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccl6P27784 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccl6P27784 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccl6P27784 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccl6P27784 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccl6P27784 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccl6P27784 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccl6P27784 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ccl6P27784 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccl6P27784 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccl6P27784 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Ccl6P27784 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccl6P27784 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms