Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC11.76□□□□□ -0.53
PtcraP0C6B2 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
PtcraP0C6B2 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC11.76□□□□□ -0.53
PtcraP0C6B2 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
PtcraP0C6B2 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
PtcraP0C6B2 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
PtcraP0C6B2 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
PtcraP0C6B2 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.76□□□□□ -0.53
PtcraP0C6B2 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
PtcraP0C6B2 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
PtcraP0C6B2 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
PtcraP0C6B2 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
PtcraP0C6B2 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
PtcraP0C6B2 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
PtcraP0C6B2 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
PtcraP0C6B2 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
PtcraP0C6B2 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC11.76□□□□□ -0.53
PtcraP0C6B2 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
PtcraP0C6B2 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
PtcraP0C6B2 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
PtcraP0C6B2 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
PtcraP0C6B2 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
PtcraP0C6B2 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
PtcraP0C6B2 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.75□□□□□ -0.53
PtcraP0C6B2 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
PtcraP0C6B2 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.75□□□□□ -0.53
PtcraP0C6B2 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
PtcraP0C6B2 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
PtcraP0C6B2 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
PtcraP0C6B2 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
PtcraP0C6B2 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
PtcraP0C6B2 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC11.75□□□□□ -0.53
PtcraP0C6B2 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
PtcraP0C6B2 Gm15678-201ENSMUST00000117573 960 ntBASIC11.75□□□□□ -0.53
PtcraP0C6B2 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
PtcraP0C6B2 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC11.75□□□□□ -0.53
PtcraP0C6B2 Gm5866-201ENSMUST00000177881 973 ntBASIC11.75□□□□□ -0.53
PtcraP0C6B2 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
PtcraP0C6B2 Gm38223-201ENSMUST00000194484 695 ntBASIC11.75□□□□□ -0.53
PtcraP0C6B2 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
PtcraP0C6B2 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
PtcraP0C6B2 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
PtcraP0C6B2 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
PtcraP0C6B2 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
PtcraP0C6B2 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
PtcraP0C6B2 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
PtcraP0C6B2 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
PtcraP0C6B2 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
PtcraP0C6B2 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
PtcraP0C6B2 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
PtcraP0C6B2 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
PtcraP0C6B2 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
PtcraP0C6B2 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
PtcraP0C6B2 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
PtcraP0C6B2 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
PtcraP0C6B2 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
PtcraP0C6B2 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
PtcraP0C6B2 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
PtcraP0C6B2 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
PtcraP0C6B2 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
PtcraP0C6B2 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
PtcraP0C6B2 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC11.74□□□□□ -0.53
PtcraP0C6B2 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
PtcraP0C6B2 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
PtcraP0C6B2 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
PtcraP0C6B2 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
PtcraP0C6B2 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
PtcraP0C6B2 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
PtcraP0C6B2 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
PtcraP0C6B2 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
PtcraP0C6B2 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
PtcraP0C6B2 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
PtcraP0C6B2 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
PtcraP0C6B2 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
PtcraP0C6B2 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
PtcraP0C6B2 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
PtcraP0C6B2 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
PtcraP0C6B2 Mir874-201ENSMUST00000104769 76 ntBASIC11.74□□□□□ -0.53
PtcraP0C6B2 Gm12416-201ENSMUST00000120911 1008 ntBASIC11.74□□□□□ -0.53
PtcraP0C6B2 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC11.74□□□□□ -0.53
PtcraP0C6B2 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
PtcraP0C6B2 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC11.74□□□□□ -0.53
PtcraP0C6B2 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
PtcraP0C6B2 Gm37917-201ENSMUST00000194711 392 ntBASIC11.74□□□□□ -0.53
PtcraP0C6B2 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
PtcraP0C6B2 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
PtcraP0C6B2 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.74□□□□□ -0.53
PtcraP0C6B2 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.74□□□□□ -0.53
PtcraP0C6B2 Gm45638-201ENSMUST00000211507 2878 ntBASIC11.74□□□□□ -0.53
PtcraP0C6B2 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC11.74□□□□□ -0.53
PtcraP0C6B2 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
PtcraP0C6B2 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
PtcraP0C6B2 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
PtcraP0C6B2 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
PtcraP0C6B2 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
PtcraP0C6B2 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
PtcraP0C6B2 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
PtcraP0C6B2 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
PtcraP0C6B2 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
PtcraP0C6B2 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms