Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
P04224 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
P04224 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
P04224 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
P04224 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
P04224 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
P04224 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
P04224 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
P04224 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
P04224 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
P04224 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
P04224 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
P04224 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
P04224 AC115735.4-201ENSMUST00000227460 1944 ntBASIC11.86□□□□□ -0.51
P04224 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
P04224 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P04224 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
P04224 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P04224 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
P04224 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
P04224 AC126549.2-201ENSMUST00000223997 1976 ntBASIC11.85□□□□□ -0.51
P04224 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
P04224 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
P04224 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
P04224 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
P04224 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
P04224 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
P04224 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P04224 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P04224 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.85□□□□□ -0.51
P04224 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P04224 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
P04224 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
P04224 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P04224 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
P04224 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
P04224 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
P04224 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
P04224 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
P04224 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC11.85□□□□□ -0.51
P04224 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
P04224 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC11.85□□□□□ -0.51
P04224 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC11.85□□□□□ -0.51
P04224 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC11.85□□□□□ -0.51
P04224 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P04224 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P04224 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P04224 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.85□□□□□ -0.51
P04224 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
P04224 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P04224 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P04224 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
P04224 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P04224 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P04224 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P04224 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
P04224 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P04224 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
P04224 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P04224 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.85□□□□□ -0.51
P04224 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
P04224 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
P04224 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P04224 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P04224 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
P04224 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
P04224 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.84□□□□□ -0.51
P04224 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
P04224 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.84□□□□□ -0.51
P04224 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
P04224 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
P04224 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
P04224 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
P04224 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
P04224 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
P04224 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC11.84□□□□□ -0.51
P04224 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
P04224 Gm10275-202ENSMUST00000168697 495 ntBASIC11.84□□□□□ -0.51
P04224 CT025555.1-201ENSMUST00000225901 1217 ntBASIC11.84□□□□□ -0.51
P04224 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
P04224 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P04224 Gm10275-201ENSMUST00000092620 635 ntBASIC11.84□□□□□ -0.51
P04224 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
P04224 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P04224 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
P04224 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
P04224 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.84□□□□□ -0.51
P04224 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
P04224 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
P04224 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
P04224 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P04224 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P04224 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
P04224 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.84□□□□□ -0.51
P04224 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P04224 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
P04224 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
P04224 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
P04224 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
P04224 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms