Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
P01852 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.37□□□□□ -0.43
P01852 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P01852 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P01852 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P01852 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.37□□□□□ -0.43
P01852 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.37□□□□□ -0.43
P01852 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P01852 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P01852 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
P01852 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.37□□□□□ -0.43
P01852 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.37□□□□□ -0.43
P01852 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.37□□□□□ -0.43
P01852 Gm43094-201ENSMUST00000196549 921 ntBASIC12.37□□□□□ -0.43
P01852 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P01852 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P01852 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P01852 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
P01852 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
P01852 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
P01852 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P01852 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
P01852 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
P01852 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
P01852 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
P01852 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.37□□□□□ -0.43
P01852 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
P01852 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P01852 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
P01852 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
P01852 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P01852 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P01852 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
P01852 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
P01852 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
P01852 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
P01852 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P01852 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
P01852 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P01852 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.37□□□□□ -0.43
P01852 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
P01852 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
P01852 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
P01852 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
P01852 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
P01852 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
P01852 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
P01852 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
P01852 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
P01852 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
P01852 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
P01852 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
P01852 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
P01852 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
P01852 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
P01852 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
P01852 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.36□□□□□ -0.43
P01852 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
P01852 Gm14928-201ENSMUST00000120198 477 ntBASIC12.36□□□□□ -0.43
P01852 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.36□□□□□ -0.43
P01852 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.36□□□□□ -0.43
P01852 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
P01852 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.36□□□□□ -0.43
P01852 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
P01852 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.36□□□□□ -0.43
P01852 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
P01852 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.36□□□□□ -0.43
P01852 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
P01852 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
P01852 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
P01852 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
P01852 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
P01852 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
P01852 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
P01852 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
P01852 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
P01852 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
P01852 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
P01852 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
P01852 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.36□□□□□ -0.43
P01852 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P01852 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
P01852 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
P01852 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
P01852 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
P01852 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P01852 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
P01852 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P01852 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
P01852 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P01852 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
P01852 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
P01852 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.35□□□□□ -0.43
P01852 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
P01852 Gm12485-201ENSMUST00000119641 291 ntBASIC12.35□□□□□ -0.43
P01852 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.35□□□□□ -0.43
P01852 Gm12091-201ENSMUST00000146791 830 ntBASIC12.35□□□□□ -0.43
P01852 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
P01852 Gm26464-201ENSMUST00000157094 305 ntBASIC12.35□□□□□ -0.43
P01852 Gm23984-201ENSMUST00000157139 203 ntBASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 88.8 ms