Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hcn1O88704 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.97□□□□□ -0.33
Hcn1O88704 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hcn1O88704 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hcn1O88704 Gm12585-201ENSMUST00000117307 290 ntBASIC12.97□□□□□ -0.33
Hcn1O88704 Gm15321-201ENSMUST00000121290 288 ntBASIC12.97□□□□□ -0.33
Hcn1O88704 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.97□□□□□ -0.33
Hcn1O88704 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.97□□□□□ -0.33
Hcn1O88704 Gm16215-201ENSMUST00000161990 637 ntBASIC12.97□□□□□ -0.33
Hcn1O88704 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Hcn1O88704 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.97□□□□□ -0.33
Hcn1O88704 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Hcn1O88704 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.97□□□□□ -0.33
Hcn1O88704 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.97□□□□□ -0.33
Hcn1O88704 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hcn1O88704 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Hcn1O88704 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hcn1O88704 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Hcn1O88704 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hcn1O88704 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.97□□□□□ -0.33
Hcn1O88704 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hcn1O88704 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hcn1O88704 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Hcn1O88704 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Hcn1O88704 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hcn1O88704 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hcn1O88704 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hcn1O88704 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.96□□□□□ -0.33
Hcn1O88704 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hcn1O88704 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Hcn1O88704 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Hcn1O88704 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hcn1O88704 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Hcn1O88704 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hcn1O88704 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hcn1O88704 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Hcn1O88704 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hcn1O88704 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hcn1O88704 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Hcn1O88704 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.96□□□□□ -0.33
Hcn1O88704 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Hcn1O88704 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hcn1O88704 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Hcn1O88704 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.96□□□□□ -0.33
Hcn1O88704 Gm7730-201ENSMUST00000212486 454 ntBASIC12.96□□□□□ -0.33
Hcn1O88704 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.96□□□□□ -0.33
Hcn1O88704 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.96□□□□□ -0.33
Hcn1O88704 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hcn1O88704 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.96□□□□□ -0.33
Hcn1O88704 Gm20445-201ENSMUST00000061905 565 ntBASIC12.96□□□□□ -0.33
Hcn1O88704 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Hcn1O88704 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hcn1O88704 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hcn1O88704 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hcn1O88704 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hcn1O88704 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.96□□□□□ -0.34
Hcn1O88704 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hcn1O88704 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hcn1O88704 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hcn1O88704 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Hcn1O88704 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Hcn1O88704 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hcn1O88704 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.95□□□□□ -0.34
Hcn1O88704 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Hcn1O88704 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hcn1O88704 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hcn1O88704 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Hcn1O88704 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hcn1O88704 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Hcn1O88704 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hcn1O88704 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Hcn1O88704 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Hcn1O88704 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hcn1O88704 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hcn1O88704 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hcn1O88704 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Hcn1O88704 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hcn1O88704 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hcn1O88704 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Hcn1O88704 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.95□□□□□ -0.34
Hcn1O88704 Gm5866-201ENSMUST00000177881 973 ntBASIC12.95□□□□□ -0.34
Hcn1O88704 Gm9522-201ENSMUST00000182394 926 ntBASIC12.95□□□□□ -0.34
Hcn1O88704 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Hcn1O88704 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Hcn1O88704 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.95□□□□□ -0.34
Hcn1O88704 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hcn1O88704 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hcn1O88704 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.95□□□□□ -0.34
Hcn1O88704 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.95□□□□□ -0.34
Hcn1O88704 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Hcn1O88704 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hcn1O88704 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hcn1O88704 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.95□□□□□ -0.34
Hcn1O88704 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Hcn1O88704 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hcn1O88704 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Hcn1O88704 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hcn1O88704 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hcn1O88704 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Hcn1O88704 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms