Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Mmp8O70138 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mmp8O70138 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mmp8O70138 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mmp8O70138 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mmp8O70138 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Mmp8O70138 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mmp8O70138 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mmp8O70138 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mmp8O70138 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Mmp8O70138 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mmp8O70138 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mmp8O70138 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Mmp8O70138 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Mmp8O70138 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Mmp8O70138 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mmp8O70138 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Mmp8O70138 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mmp8O70138 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mmp8O70138 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mmp8O70138 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mmp8O70138 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mmp8O70138 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mmp8O70138 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC16.44■□□□□ 0.22
Mmp8O70138 Gm6447-201ENSMUST00000118905 835 ntBASIC16.44■□□□□ 0.22
Mmp8O70138 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mmp8O70138 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC16.44■□□□□ 0.22
Mmp8O70138 Ighv5-13-201ENSMUST00000193550 290 ntBASIC16.44■□□□□ 0.22
Mmp8O70138 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mmp8O70138 Gm18473-201ENSMUST00000220543 868 ntBASIC16.44■□□□□ 0.22
Mmp8O70138 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mmp8O70138 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Mmp8O70138 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mmp8O70138 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mmp8O70138 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mmp8O70138 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC16.44■□□□□ 0.22
Mmp8O70138 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mmp8O70138 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Mmp8O70138 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Mmp8O70138 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Mmp8O70138 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mmp8O70138 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Mmp8O70138 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Mmp8O70138 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Mmp8O70138 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mmp8O70138 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mmp8O70138 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mmp8O70138 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mmp8O70138 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Mmp8O70138 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC16.43■□□□□ 0.22
Mmp8O70138 Gm7653-201ENSMUST00000214567 508 ntBASIC16.43■□□□□ 0.22
Mmp8O70138 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC16.43■□□□□ 0.22
Mmp8O70138 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mmp8O70138 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mmp8O70138 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mmp8O70138 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mmp8O70138 Gm6198-201ENSMUST00000191337 2929 ntBASIC16.43■□□□□ 0.22
Mmp8O70138 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Mmp8O70138 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mmp8O70138 Gm37795-201ENSMUST00000194216 2459 ntBASIC16.43■□□□□ 0.22
Mmp8O70138 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mmp8O70138 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Mmp8O70138 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Mmp8O70138 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Mmp8O70138 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp8O70138 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp8O70138 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Mmp8O70138 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC16.42■□□□□ 0.22
Mmp8O70138 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp8O70138 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp8O70138 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
Mmp8O70138 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC16.42■□□□□ 0.22
Mmp8O70138 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Mmp8O70138 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp8O70138 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp8O70138 Gm5303-201ENSMUST00000117943 1252 ntBASIC16.42■□□□□ 0.22
Mmp8O70138 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp8O70138 Gm12960-201ENSMUST00000120017 1066 ntBASIC16.42■□□□□ 0.22
Mmp8O70138 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp8O70138 Gm42929-201ENSMUST00000198374 1286 ntBASIC16.42■□□□□ 0.22
Mmp8O70138 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC16.42■□□□□ 0.22
Mmp8O70138 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC16.42■□□□□ 0.22
Mmp8O70138 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Mmp8O70138 Gm7287-201ENSMUST00000205267 602 ntBASIC16.42■□□□□ 0.22
Mmp8O70138 AC134335.2-201ENSMUST00000227660 440 ntBASIC16.42■□□□□ 0.22
Mmp8O70138 Itm2b-204ENSMUST00000228637 783 ntBASIC16.42■□□□□ 0.22
Mmp8O70138 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp8O70138 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp8O70138 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC16.42■□□□□ 0.22
Mmp8O70138 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp8O70138 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp8O70138 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp8O70138 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp8O70138 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp8O70138 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp8O70138 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Mmp8O70138 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp8O70138 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Mmp8O70138 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp8O70138 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms