Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cxcl13O55038 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cxcl13O55038 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Cxcl13O55038 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cxcl13O55038 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cxcl13O55038 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cxcl13O55038 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cxcl13O55038 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cxcl13O55038 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cxcl13O55038 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cxcl13O55038 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cxcl13O55038 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cxcl13O55038 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cxcl13O55038 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cxcl13O55038 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cxcl13O55038 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cxcl13O55038 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cxcl13O55038 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC11.4□□□□□ -0.59
Cxcl13O55038 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.4□□□□□ -0.59
Cxcl13O55038 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Cxcl13O55038 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cxcl13O55038 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cxcl13O55038 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cxcl13O55038 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC11.39□□□□□ -0.59
Cxcl13O55038 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cxcl13O55038 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Cxcl13O55038 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.39□□□□□ -0.59
Cxcl13O55038 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cxcl13O55038 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cxcl13O55038 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cxcl13O55038 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cxcl13O55038 Gm45779-201ENSMUST00000212189 4064 ntBASIC11.39□□□□□ -0.59
Cxcl13O55038 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cxcl13O55038 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cxcl13O55038 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cxcl13O55038 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cxcl13O55038 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cxcl13O55038 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cxcl13O55038 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.39□□□□□ -0.59
Cxcl13O55038 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cxcl13O55038 Gm4271-201ENSMUST00000174444 973 ntBASIC11.39□□□□□ -0.59
Cxcl13O55038 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.39□□□□□ -0.59
Cxcl13O55038 Gm28182-201ENSMUST00000188354 2477 ntBASIC11.39□□□□□ -0.59
Cxcl13O55038 Gm37424-201ENSMUST00000191727 561 ntBASIC11.39□□□□□ -0.59
Cxcl13O55038 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cxcl13O55038 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cxcl13O55038 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.39□□□□□ -0.59
Cxcl13O55038 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cxcl13O55038 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cxcl13O55038 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cxcl13O55038 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cxcl13O55038 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Cxcl13O55038 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Cxcl13O55038 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cxcl13O55038 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cxcl13O55038 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cxcl13O55038 Gm18630-201ENSMUST00000222109 1397 ntBASIC11.39□□□□□ -0.59
Cxcl13O55038 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cxcl13O55038 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cxcl13O55038 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Cxcl13O55038 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cxcl13O55038 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Cxcl13O55038 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cxcl13O55038 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cxcl13O55038 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cxcl13O55038 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cxcl13O55038 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Cxcl13O55038 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cxcl13O55038 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cxcl13O55038 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cxcl13O55038 Gm12500-202ENSMUST00000186471 2428 ntBASIC11.38□□□□□ -0.59
Cxcl13O55038 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC11.38□□□□□ -0.59
Cxcl13O55038 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cxcl13O55038 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cxcl13O55038 AC167013.2-201ENSMUST00000228520 2684 ntBASIC11.38□□□□□ -0.59
Cxcl13O55038 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cxcl13O55038 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cxcl13O55038 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
Cxcl13O55038 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cxcl13O55038 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Cxcl13O55038 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cxcl13O55038 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cxcl13O55038 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cxcl13O55038 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cxcl13O55038 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.38□□□□□ -0.59
Cxcl13O55038 Gm14350-201ENSMUST00000116642 640 ntBASIC11.38□□□□□ -0.59
Cxcl13O55038 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.38□□□□□ -0.59
Cxcl13O55038 Gm17420-201ENSMUST00000164753 153 ntBASIC11.38□□□□□ -0.59
Cxcl13O55038 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Cxcl13O55038 Gm37922-201ENSMUST00000195596 455 ntBASIC11.38□□□□□ -0.59
Cxcl13O55038 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cxcl13O55038 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.38□□□□□ -0.59
Cxcl13O55038 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cxcl13O55038 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cxcl13O55038 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Cxcl13O55038 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cxcl13O55038 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Cxcl13O55038 Sorbs3-204ENSMUST00000227929 2460 ntBASIC11.38□□□□□ -0.59
Cxcl13O55038 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cxcl13O55038 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms