Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.72□□□□□ -0.37
Cx3cl1O35188 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cl1O35188 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cl1O35188 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cl1O35188 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cl1O35188 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.72□□□□□ -0.37
Cx3cl1O35188 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cl1O35188 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cl1O35188 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Cx3cl1O35188 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cl1O35188 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cl1O35188 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cl1O35188 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.72□□□□□ -0.37
Cx3cl1O35188 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cl1O35188 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cl1O35188 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Cx3cl1O35188 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Cx3cl1O35188 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cl1O35188 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Cx3cl1O35188 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Cx3cl1O35188 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.72□□□□□ -0.37
Cx3cl1O35188 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cl1O35188 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Cx3cl1O35188 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cx3cl1O35188 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cx3cl1O35188 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.71□□□□□ -0.37
Cx3cl1O35188 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cx3cl1O35188 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cx3cl1O35188 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cx3cl1O35188 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
Cx3cl1O35188 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cx3cl1O35188 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cx3cl1O35188 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cx3cl1O35188 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Cx3cl1O35188 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cx3cl1O35188 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cx3cl1O35188 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.71□□□□□ -0.37
Cx3cl1O35188 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.71□□□□□ -0.37
Cx3cl1O35188 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cx3cl1O35188 Gm18018-201ENSMUST00000198273 408 ntBASIC12.71□□□□□ -0.37
Cx3cl1O35188 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.71□□□□□ -0.37
Cx3cl1O35188 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Cx3cl1O35188 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.71□□□□□ -0.37
Cx3cl1O35188 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.71□□□□□ -0.37
Cx3cl1O35188 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cx3cl1O35188 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cx3cl1O35188 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cx3cl1O35188 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cx3cl1O35188 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cx3cl1O35188 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cx3cl1O35188 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cx3cl1O35188 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.71□□□□□ -0.38
Cx3cl1O35188 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cx3cl1O35188 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Cx3cl1O35188 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cx3cl1O35188 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cx3cl1O35188 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cx3cl1O35188 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Cx3cl1O35188 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Cx3cl1O35188 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Cx3cl1O35188 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cx3cl1O35188 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cx3cl1O35188 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cx3cl1O35188 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cx3cl1O35188 Gm12485-201ENSMUST00000119641 291 ntBASIC12.7□□□□□ -0.38
Cx3cl1O35188 Gm14928-201ENSMUST00000120198 477 ntBASIC12.7□□□□□ -0.38
Cx3cl1O35188 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.7□□□□□ -0.38
Cx3cl1O35188 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.7□□□□□ -0.38
Cx3cl1O35188 Gm26464-201ENSMUST00000157094 305 ntBASIC12.7□□□□□ -0.38
Cx3cl1O35188 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.7□□□□□ -0.38
Cx3cl1O35188 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cx3cl1O35188 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.7□□□□□ -0.38
Cx3cl1O35188 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.7□□□□□ -0.38
Cx3cl1O35188 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.7□□□□□ -0.38
Cx3cl1O35188 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cx3cl1O35188 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cx3cl1O35188 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cx3cl1O35188 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cx3cl1O35188 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Cx3cl1O35188 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Cx3cl1O35188 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cx3cl1O35188 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.7□□□□□ -0.38
Cx3cl1O35188 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Cx3cl1O35188 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cx3cl1O35188 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cx3cl1O35188 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cx3cl1O35188 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cx3cl1O35188 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cx3cl1O35188 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cx3cl1O35188 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cx3cl1O35188 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cx3cl1O35188 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cx3cl1O35188 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cx3cl1O35188 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Cx3cl1O35188 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cx3cl1O35188 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cx3cl1O35188 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Cx3cl1O35188 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Cx3cl1O35188 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Cx3cl1O35188 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms