Protein–RNA interactions for Protein: G5E8P0

Tubgcp6, Gamma-tubulin complex component 6, mousemouse

Predictions only

Length 1,769 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp6G5E8P0 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tubgcp6G5E8P0 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC18.37■□□□□ 0.53
Tubgcp6G5E8P0 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tubgcp6G5E8P0 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Tubgcp6G5E8P0 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Tubgcp6G5E8P0 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tubgcp6G5E8P0 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tubgcp6G5E8P0 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tubgcp6G5E8P0 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tubgcp6G5E8P0 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tubgcp6G5E8P0 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tubgcp6G5E8P0 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tubgcp6G5E8P0 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tubgcp6G5E8P0 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Tubgcp6G5E8P0 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Tubgcp6G5E8P0 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tubgcp6G5E8P0 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Tubgcp6G5E8P0 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC18.36■□□□□ 0.53
Tubgcp6G5E8P0 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC18.36■□□□□ 0.53
Tubgcp6G5E8P0 Gm8913-201ENSMUST00000209491 641 ntBASIC18.36■□□□□ 0.53
Tubgcp6G5E8P0 AC154276.3-201ENSMUST00000227643 998 ntBASIC18.36■□□□□ 0.53
Tubgcp6G5E8P0 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Tubgcp6G5E8P0 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tubgcp6G5E8P0 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tubgcp6G5E8P0 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tubgcp6G5E8P0 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tubgcp6G5E8P0 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tubgcp6G5E8P0 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tubgcp6G5E8P0 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Tubgcp6G5E8P0 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tubgcp6G5E8P0 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tubgcp6G5E8P0 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.36■□□□□ 0.53
Tubgcp6G5E8P0 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tubgcp6G5E8P0 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tubgcp6G5E8P0 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tubgcp6G5E8P0 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tubgcp6G5E8P0 AC154262.2-201ENSMUST00000224310 2293 ntBASIC18.35■□□□□ 0.53
Tubgcp6G5E8P0 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Tubgcp6G5E8P0 Gm15547-201ENSMUST00000122152 333 ntBASIC18.35■□□□□ 0.53
Tubgcp6G5E8P0 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Tubgcp6G5E8P0 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC18.35■□□□□ 0.53
Tubgcp6G5E8P0 Gm22121-201ENSMUST00000175148 54 ntBASIC18.35■□□□□ 0.53
Tubgcp6G5E8P0 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC18.35■□□□□ 0.53
Tubgcp6G5E8P0 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC18.35■□□□□ 0.53
Tubgcp6G5E8P0 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tubgcp6G5E8P0 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Tubgcp6G5E8P0 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC18.35■□□□□ 0.53
Tubgcp6G5E8P0 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tubgcp6G5E8P0 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Tubgcp6G5E8P0 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tubgcp6G5E8P0 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Tubgcp6G5E8P0 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tubgcp6G5E8P0 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tubgcp6G5E8P0 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tubgcp6G5E8P0 Gm6335-201ENSMUST00000118081 1194 ntBASIC18.35■□□□□ 0.53
Tubgcp6G5E8P0 Gm4993-201ENSMUST00000118719 1174 ntBASIC18.35■□□□□ 0.53
Tubgcp6G5E8P0 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tubgcp6G5E8P0 Gm7816-201ENSMUST00000119884 1194 ntBASIC18.35■□□□□ 0.53
Tubgcp6G5E8P0 Gm15542-201ENSMUST00000121585 1194 ntBASIC18.35■□□□□ 0.53
Tubgcp6G5E8P0 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC18.35■□□□□ 0.53
Tubgcp6G5E8P0 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Tubgcp6G5E8P0 Gm9211-201ENSMUST00000182882 975 ntBASIC18.35■□□□□ 0.53
Tubgcp6G5E8P0 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Tubgcp6G5E8P0 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tubgcp6G5E8P0 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tubgcp6G5E8P0 n-R5s77-201ENSMUST00000083757 119 ntBASIC18.35■□□□□ 0.53
Tubgcp6G5E8P0 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tubgcp6G5E8P0 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Tubgcp6G5E8P0 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Tubgcp6G5E8P0 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tubgcp6G5E8P0 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Tubgcp6G5E8P0 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tubgcp6G5E8P0 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Tubgcp6G5E8P0 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tubgcp6G5E8P0 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tubgcp6G5E8P0 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tubgcp6G5E8P0 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Tubgcp6G5E8P0 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tubgcp6G5E8P0 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.34■□□□□ 0.53
Tubgcp6G5E8P0 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Tubgcp6G5E8P0 Gm13875-201ENSMUST00000120162 282 ntBASIC18.34■□□□□ 0.53
Tubgcp6G5E8P0 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC18.34■□□□□ 0.53
Tubgcp6G5E8P0 Gm2546-201ENSMUST00000182630 991 ntBASIC18.34■□□□□ 0.53
Tubgcp6G5E8P0 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC18.34■□□□□ 0.53
Tubgcp6G5E8P0 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tubgcp6G5E8P0 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC18.34■□□□□ 0.53
Tubgcp6G5E8P0 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tubgcp6G5E8P0 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tubgcp6G5E8P0 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tubgcp6G5E8P0 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tubgcp6G5E8P0 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tubgcp6G5E8P0 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC18.33■□□□□ 0.53
Tubgcp6G5E8P0 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Tubgcp6G5E8P0 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
Tubgcp6G5E8P0 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Tubgcp6G5E8P0 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
Tubgcp6G5E8P0 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC18.33■□□□□ 0.53
Tubgcp6G5E8P0 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Tubgcp6G5E8P0 Gm9540-201ENSMUST00000188230 478 ntBASIC18.33■□□□□ 0.53
Tubgcp6G5E8P0 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms