Protein–RNA interactions for Protein: E9Q6B2

Ccdc85c, Coiled-coil domain-containing protein 85C, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85cE9Q6B2 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc85cE9Q6B2 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC16.5■□□□□ 0.23
Ccdc85cE9Q6B2 Gm13875-201ENSMUST00000120162 282 ntBASIC16.5■□□□□ 0.23
Ccdc85cE9Q6B2 Gm12266-201ENSMUST00000120311 962 ntBASIC16.5■□□□□ 0.23
Ccdc85cE9Q6B2 Gm24749-201ENSMUST00000157838 343 ntBASIC16.5■□□□□ 0.23
Ccdc85cE9Q6B2 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc85cE9Q6B2 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC16.5■□□□□ 0.23
Ccdc85cE9Q6B2 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc85cE9Q6B2 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc85cE9Q6B2 Gm5904-201ENSMUST00000210286 865 ntBASIC16.5■□□□□ 0.23
Ccdc85cE9Q6B2 Gm8712-201ENSMUST00000221090 701 ntBASIC16.5■□□□□ 0.23
Ccdc85cE9Q6B2 Dhrs4-202ENSMUST00000226168 828 ntBASIC16.5■□□□□ 0.23
Ccdc85cE9Q6B2 AC113031.8-201ENSMUST00000227856 631 ntBASIC16.5■□□□□ 0.23
Ccdc85cE9Q6B2 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Ccdc85cE9Q6B2 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC16.5■□□□□ 0.23
Ccdc85cE9Q6B2 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc85cE9Q6B2 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc85cE9Q6B2 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc85cE9Q6B2 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc85cE9Q6B2 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc85cE9Q6B2 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Ccdc85cE9Q6B2 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
Ccdc85cE9Q6B2 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc85cE9Q6B2 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc85cE9Q6B2 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc85cE9Q6B2 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc85cE9Q6B2 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc85cE9Q6B2 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC16.49■□□□□ 0.23
Ccdc85cE9Q6B2 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Ccdc85cE9Q6B2 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc85cE9Q6B2 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC16.49■□□□□ 0.23
Ccdc85cE9Q6B2 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc85cE9Q6B2 Rn7s6-201ENSMUST00000175005 291 ntBASIC16.49■□□□□ 0.23
Ccdc85cE9Q6B2 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC16.49■□□□□ 0.23
Ccdc85cE9Q6B2 AC154222.2-201ENSMUST00000225848 607 ntBASIC16.49■□□□□ 0.23
Ccdc85cE9Q6B2 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc85cE9Q6B2 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc85cE9Q6B2 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc85cE9Q6B2 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Ccdc85cE9Q6B2 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Ccdc85cE9Q6B2 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc85cE9Q6B2 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc85cE9Q6B2 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc85cE9Q6B2 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc85cE9Q6B2 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Ccdc85cE9Q6B2 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc85cE9Q6B2 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc85cE9Q6B2 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Ccdc85cE9Q6B2 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc85cE9Q6B2 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc85cE9Q6B2 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC16.48■□□□□ 0.23
Ccdc85cE9Q6B2 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc85cE9Q6B2 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc85cE9Q6B2 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Ccdc85cE9Q6B2 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc85cE9Q6B2 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc85cE9Q6B2 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Ccdc85cE9Q6B2 Gm45495-201ENSMUST00000200940 1700 ntBASIC16.48■□□□□ 0.23
Ccdc85cE9Q6B2 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc85cE9Q6B2 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc85cE9Q6B2 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Ccdc85cE9Q6B2 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc85cE9Q6B2 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC16.48■□□□□ 0.23
Ccdc85cE9Q6B2 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc85cE9Q6B2 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc85cE9Q6B2 Gm15432-201ENSMUST00000121106 195 ntBASIC16.48■□□□□ 0.23
Ccdc85cE9Q6B2 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc85cE9Q6B2 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc85cE9Q6B2 Gm29155-201ENSMUST00000185910 269 ntBASIC16.48■□□□□ 0.23
Ccdc85cE9Q6B2 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc85cE9Q6B2 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC16.48■□□□□ 0.23
Ccdc85cE9Q6B2 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Ccdc85cE9Q6B2 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc85cE9Q6B2 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc85cE9Q6B2 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc85cE9Q6B2 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc85cE9Q6B2 Gm10179-201ENSMUST00000086233 688 ntBASIC16.48■□□□□ 0.23
Ccdc85cE9Q6B2 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.48■□□□□ 0.23
Ccdc85cE9Q6B2 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc85cE9Q6B2 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc85cE9Q6B2 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Ccdc85cE9Q6B2 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc85cE9Q6B2 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc85cE9Q6B2 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc85cE9Q6B2 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc85cE9Q6B2 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc85cE9Q6B2 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC16.47■□□□□ 0.23
Ccdc85cE9Q6B2 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC16.47■□□□□ 0.23
Ccdc85cE9Q6B2 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC16.47■□□□□ 0.23
Ccdc85cE9Q6B2 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc85cE9Q6B2 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc85cE9Q6B2 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.47■□□□□ 0.23
Ccdc85cE9Q6B2 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc85cE9Q6B2 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc85cE9Q6B2 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc85cE9Q6B2 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.47■□□□□ 0.23
Ccdc85cE9Q6B2 Gm14371-201ENSMUST00000138925 1518 ntBASIC16.47■□□□□ 0.23
Ccdc85cE9Q6B2 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc85cE9Q6B2 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Ccdc85cE9Q6B2 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms