Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC11.44□□□□□ -0.58
Cpsf4lE9Q2N0 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cpsf4lE9Q2N0 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cpsf4lE9Q2N0 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC11.44□□□□□ -0.58
Cpsf4lE9Q2N0 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cpsf4lE9Q2N0 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC11.44□□□□□ -0.58
Cpsf4lE9Q2N0 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cpsf4lE9Q2N0 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cpsf4lE9Q2N0 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cpsf4lE9Q2N0 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cpsf4lE9Q2N0 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Cpsf4lE9Q2N0 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cpsf4lE9Q2N0 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.44□□□□□ -0.58
Cpsf4lE9Q2N0 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cpsf4lE9Q2N0 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cpsf4lE9Q2N0 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cpsf4lE9Q2N0 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.44□□□□□ -0.58
Cpsf4lE9Q2N0 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cpsf4lE9Q2N0 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cpsf4lE9Q2N0 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cpsf4lE9Q2N0 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.44□□□□□ -0.58
Cpsf4lE9Q2N0 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cpsf4lE9Q2N0 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cpsf4lE9Q2N0 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cpsf4lE9Q2N0 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cpsf4lE9Q2N0 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cpsf4lE9Q2N0 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cpsf4lE9Q2N0 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cpsf4lE9Q2N0 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cpsf4lE9Q2N0 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.43□□□□□ -0.58
Cpsf4lE9Q2N0 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cpsf4lE9Q2N0 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cpsf4lE9Q2N0 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cpsf4lE9Q2N0 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cpsf4lE9Q2N0 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cpsf4lE9Q2N0 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cpsf4lE9Q2N0 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Cpsf4lE9Q2N0 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cpsf4lE9Q2N0 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cpsf4lE9Q2N0 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cpsf4lE9Q2N0 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Cpsf4lE9Q2N0 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cpsf4lE9Q2N0 Gm16342-201ENSMUST00000124025 1025 ntBASIC11.43□□□□□ -0.58
Cpsf4lE9Q2N0 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cpsf4lE9Q2N0 Gm38144-201ENSMUST00000192790 465 ntBASIC11.43□□□□□ -0.58
Cpsf4lE9Q2N0 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
Cpsf4lE9Q2N0 AC073947.2-201ENSMUST00000215888 1130 ntBASIC11.43□□□□□ -0.58
Cpsf4lE9Q2N0 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cpsf4lE9Q2N0 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Cpsf4lE9Q2N0 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cpsf4lE9Q2N0 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cpsf4lE9Q2N0 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cpsf4lE9Q2N0 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.43□□□□□ -0.58
Cpsf4lE9Q2N0 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Cpsf4lE9Q2N0 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cpsf4lE9Q2N0 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cpsf4lE9Q2N0 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cpsf4lE9Q2N0 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cpsf4lE9Q2N0 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cpsf4lE9Q2N0 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cpsf4lE9Q2N0 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cpsf4lE9Q2N0 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cpsf4lE9Q2N0 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Cpsf4lE9Q2N0 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cpsf4lE9Q2N0 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC11.42□□□□□ -0.58
Cpsf4lE9Q2N0 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cpsf4lE9Q2N0 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC11.42□□□□□ -0.58
Cpsf4lE9Q2N0 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cpsf4lE9Q2N0 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cpsf4lE9Q2N0 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cpsf4lE9Q2N0 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cpsf4lE9Q2N0 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cpsf4lE9Q2N0 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cpsf4lE9Q2N0 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cpsf4lE9Q2N0 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cpsf4lE9Q2N0 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Cpsf4lE9Q2N0 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cpsf4lE9Q2N0 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC11.42□□□□□ -0.58
Cpsf4lE9Q2N0 Gm15678-201ENSMUST00000117573 960 ntBASIC11.42□□□□□ -0.58
Cpsf4lE9Q2N0 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC11.42□□□□□ -0.58
Cpsf4lE9Q2N0 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC11.42□□□□□ -0.58
Cpsf4lE9Q2N0 Gm14928-201ENSMUST00000120198 477 ntBASIC11.42□□□□□ -0.58
Cpsf4lE9Q2N0 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC11.42□□□□□ -0.58
Cpsf4lE9Q2N0 Gm38223-201ENSMUST00000194484 695 ntBASIC11.42□□□□□ -0.58
Cpsf4lE9Q2N0 Gm42550-201ENSMUST00000201553 960 ntBASIC11.42□□□□□ -0.58
Cpsf4lE9Q2N0 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC11.42□□□□□ -0.58
Cpsf4lE9Q2N0 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cpsf4lE9Q2N0 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cpsf4lE9Q2N0 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cpsf4lE9Q2N0 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Cpsf4lE9Q2N0 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Cpsf4lE9Q2N0 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cpsf4lE9Q2N0 Gm13730-201ENSMUST00000121036 1462 ntBASIC11.42□□□□□ -0.58
Cpsf4lE9Q2N0 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cpsf4lE9Q2N0 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cpsf4lE9Q2N0 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cpsf4lE9Q2N0 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cpsf4lE9Q2N0 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cpsf4lE9Q2N0 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cpsf4lE9Q2N0 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms