Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav7n-4A0A075B620 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Trav7n-4A0A075B620 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC10.21□□□□□ -0.78
Trav7n-4A0A075B620 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav7n-4A0A075B620 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav7n-4A0A075B620 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav7n-4A0A075B620 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC10.21□□□□□ -0.78
Trav7n-4A0A075B620 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC10.21□□□□□ -0.78
Trav7n-4A0A075B620 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Trav7n-4A0A075B620 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Trav7n-4A0A075B620 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav7n-4A0A075B620 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav7n-4A0A075B620 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
Trav7n-4A0A075B620 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav7n-4A0A075B620 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav7n-4A0A075B620 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Trav7n-4A0A075B620 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav7n-4A0A075B620 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC10.2□□□□□ -0.78
Trav7n-4A0A075B620 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav7n-4A0A075B620 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav7n-4A0A075B620 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav7n-4A0A075B620 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav7n-4A0A075B620 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
Trav7n-4A0A075B620 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav7n-4A0A075B620 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav7n-4A0A075B620 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav7n-4A0A075B620 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav7n-4A0A075B620 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC10.2□□□□□ -0.78
Trav7n-4A0A075B620 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC10.2□□□□□ -0.78
Trav7n-4A0A075B620 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC10.2□□□□□ -0.78
Trav7n-4A0A075B620 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav7n-4A0A075B620 Gm18856-201ENSMUST00000178096 1374 ntBASIC10.2□□□□□ -0.78
Trav7n-4A0A075B620 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Trav7n-4A0A075B620 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav7n-4A0A075B620 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav7n-4A0A075B620 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav7n-4A0A075B620 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC10.2□□□□□ -0.78
Trav7n-4A0A075B620 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav7n-4A0A075B620 AC131709.1-201ENSMUST00000224731 1180 ntBASIC10.2□□□□□ -0.78
Trav7n-4A0A075B620 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav7n-4A0A075B620 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav7n-4A0A075B620 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav7n-4A0A075B620 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav7n-4A0A075B620 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav7n-4A0A075B620 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav7n-4A0A075B620 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav7n-4A0A075B620 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav7n-4A0A075B620 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Trav7n-4A0A075B620 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC10.19□□□□□ -0.78
Trav7n-4A0A075B620 Gm28323-201ENSMUST00000186817 2499 ntBASIC10.19□□□□□ -0.78
Trav7n-4A0A075B620 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav7n-4A0A075B620 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav7n-4A0A075B620 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav7n-4A0A075B620 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Trav7n-4A0A075B620 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav7n-4A0A075B620 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav7n-4A0A075B620 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav7n-4A0A075B620 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav7n-4A0A075B620 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav7n-4A0A075B620 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav7n-4A0A075B620 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav7n-4A0A075B620 AC139350.1-201ENSMUST00000227064 1594 ntBASIC10.19□□□□□ -0.78
Trav7n-4A0A075B620 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav7n-4A0A075B620 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav7n-4A0A075B620 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav7n-4A0A075B620 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav7n-4A0A075B620 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav7n-4A0A075B620 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC10.19□□□□□ -0.78
Trav7n-4A0A075B620 Gm27920-201ENSMUST00000183953 96 ntBASIC10.19□□□□□ -0.78
Trav7n-4A0A075B620 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC10.19□□□□□ -0.78
Trav7n-4A0A075B620 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC10.19□□□□□ -0.78
Trav7n-4A0A075B620 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav7n-4A0A075B620 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav7n-4A0A075B620 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav7n-4A0A075B620 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav7n-4A0A075B620 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC10.19□□□□□ -0.78
Trav7n-4A0A075B620 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Trav7n-4A0A075B620 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav7n-4A0A075B620 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav7n-4A0A075B620 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Trav7n-4A0A075B620 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
Trav7n-4A0A075B620 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav7n-4A0A075B620 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav7n-4A0A075B620 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav7n-4A0A075B620 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav7n-4A0A075B620 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav7n-4A0A075B620 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
Trav7n-4A0A075B620 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav7n-4A0A075B620 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Trav7n-4A0A075B620 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav7n-4A0A075B620 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC10.18□□□□□ -0.78
Trav7n-4A0A075B620 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav7n-4A0A075B620 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav7n-4A0A075B620 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Trav7n-4A0A075B620 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav7n-4A0A075B620 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC10.18□□□□□ -0.78
Trav7n-4A0A075B620 Gm44401-201ENSMUST00000204462 2375 ntBASIC10.18□□□□□ -0.78
Trav7n-4A0A075B620 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav7n-4A0A075B620 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC10.18□□□□□ -0.78
Trav7n-4A0A075B620 Tmed9-203ENSMUST00000224741 1450 ntBASIC10.18□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms