Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Cdh17Q9R100 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh17Q9R100 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.21□□□□□ -0.29
Cdh17Q9R100 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh17Q9R100 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh17Q9R100 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh17Q9R100 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Cdh17Q9R100 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh17Q9R100 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh17Q9R100 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh17Q9R100 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Cdh17Q9R100 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh17Q9R100 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.21□□□□□ -0.29
Cdh17Q9R100 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh17Q9R100 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh17Q9R100 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Cdh17Q9R100 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh17Q9R100 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.21□□□□□ -0.29
Cdh17Q9R100 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh17Q9R100 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdh17Q9R100 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cdh17Q9R100 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cdh17Q9R100 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cdh17Q9R100 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.21□□□□□ -0.3
Cdh17Q9R100 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Cdh17Q9R100 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Cdh17Q9R100 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.3
Cdh17Q9R100 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cdh17Q9R100 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cdh17Q9R100 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cdh17Q9R100 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Cdh17Q9R100 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh17Q9R100 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.2□□□□□ -0.3
Cdh17Q9R100 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh17Q9R100 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh17Q9R100 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh17Q9R100 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh17Q9R100 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh17Q9R100 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Cdh17Q9R100 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.2□□□□□ -0.3
Cdh17Q9R100 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Cdh17Q9R100 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh17Q9R100 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh17Q9R100 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh17Q9R100 Gm13453-201ENSMUST00000118708 357 ntBASIC13.2□□□□□ -0.3
Cdh17Q9R100 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Cdh17Q9R100 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Cdh17Q9R100 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh17Q9R100 Gm18905-201ENSMUST00000205454 928 ntBASIC13.2□□□□□ -0.3
Cdh17Q9R100 Gm7775-201ENSMUST00000218871 853 ntBASIC13.2□□□□□ -0.3
Cdh17Q9R100 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh17Q9R100 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.2□□□□□ -0.3
Cdh17Q9R100 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh17Q9R100 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh17Q9R100 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh17Q9R100 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh17Q9R100 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh17Q9R100 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh17Q9R100 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Cdh17Q9R100 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.2□□□□□ -0.3
Cdh17Q9R100 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh17Q9R100 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh17Q9R100 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.2□□□□□ -0.3
Cdh17Q9R100 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdh17Q9R100 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh17Q9R100 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh17Q9R100 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh17Q9R100 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh17Q9R100 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.19□□□□□ -0.3
Cdh17Q9R100 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh17Q9R100 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Cdh17Q9R100 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh17Q9R100 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh17Q9R100 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh17Q9R100 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh17Q9R100 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh17Q9R100 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh17Q9R100 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh17Q9R100 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh17Q9R100 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.19□□□□□ -0.3
Cdh17Q9R100 Gm4875-201ENSMUST00000118257 786 ntBASIC13.19□□□□□ -0.3
Cdh17Q9R100 Gm13223-201ENSMUST00000118609 747 ntBASIC13.19□□□□□ -0.3
Cdh17Q9R100 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.19□□□□□ -0.3
Cdh17Q9R100 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh17Q9R100 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Cdh17Q9R100 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Cdh17Q9R100 Gm27772-201ENSMUST00000184900 187 ntBASIC13.19□□□□□ -0.3
Cdh17Q9R100 Gm17837-201ENSMUST00000186435 985 ntBASIC13.19□□□□□ -0.3
Cdh17Q9R100 Gm37935-201ENSMUST00000192012 982 ntBASIC13.19□□□□□ -0.3
Cdh17Q9R100 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh17Q9R100 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Cdh17Q9R100 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.19□□□□□ -0.3
Cdh17Q9R100 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh17Q9R100 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.19□□□□□ -0.3
Cdh17Q9R100 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.19□□□□□ -0.3
Cdh17Q9R100 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh17Q9R100 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Cdh17Q9R100 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh17Q9R100 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdh17Q9R100 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms