Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk3aQ9JKX8 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.01□□□□□ -0.33
Upk3aQ9JKX8 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk3aQ9JKX8 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Upk3aQ9JKX8 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk3aQ9JKX8 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk3aQ9JKX8 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk3aQ9JKX8 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk3aQ9JKX8 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Upk3aQ9JKX8 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.01□□□□□ -0.33
Upk3aQ9JKX8 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.01□□□□□ -0.33
Upk3aQ9JKX8 Gm6745-201ENSMUST00000199216 526 ntBASIC13.01□□□□□ -0.33
Upk3aQ9JKX8 Gm45384-201ENSMUST00000210451 277 ntBASIC13.01□□□□□ -0.33
Upk3aQ9JKX8 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk3aQ9JKX8 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk3aQ9JKX8 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Upk3aQ9JKX8 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Upk3aQ9JKX8 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk3aQ9JKX8 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Upk3aQ9JKX8 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Upk3aQ9JKX8 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Upk3aQ9JKX8 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk3aQ9JKX8 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk3aQ9JKX8 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk3aQ9JKX8 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Upk3aQ9JKX8 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk3aQ9JKX8 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk3aQ9JKX8 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Upk3aQ9JKX8 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Upk3aQ9JKX8 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk3aQ9JKX8 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk3aQ9JKX8 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Upk3aQ9JKX8 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Upk3aQ9JKX8 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Upk3aQ9JKX8 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13□□□□□ -0.33
Upk3aQ9JKX8 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Upk3aQ9JKX8 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Upk3aQ9JKX8 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Upk3aQ9JKX8 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Upk3aQ9JKX8 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Upk3aQ9JKX8 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Upk3aQ9JKX8 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Upk3aQ9JKX8 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Upk3aQ9JKX8 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13□□□□□ -0.33
Upk3aQ9JKX8 Gm8463-201ENSMUST00000208573 613 ntBASIC13□□□□□ -0.33
Upk3aQ9JKX8 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13□□□□□ -0.33
Upk3aQ9JKX8 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Upk3aQ9JKX8 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Upk3aQ9JKX8 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13□□□□□ -0.33
Upk3aQ9JKX8 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Upk3aQ9JKX8 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13□□□□□ -0.33
Upk3aQ9JKX8 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13□□□□□ -0.33
Upk3aQ9JKX8 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13□□□□□ -0.33
Upk3aQ9JKX8 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Upk3aQ9JKX8 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk3aQ9JKX8 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.99□□□□□ -0.33
Upk3aQ9JKX8 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk3aQ9JKX8 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Upk3aQ9JKX8 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk3aQ9JKX8 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk3aQ9JKX8 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk3aQ9JKX8 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk3aQ9JKX8 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk3aQ9JKX8 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk3aQ9JKX8 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Upk3aQ9JKX8 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk3aQ9JKX8 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.99□□□□□ -0.33
Upk3aQ9JKX8 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.99□□□□□ -0.33
Upk3aQ9JKX8 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Upk3aQ9JKX8 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.99□□□□□ -0.33
Upk3aQ9JKX8 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.99□□□□□ -0.33
Upk3aQ9JKX8 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.99□□□□□ -0.33
Upk3aQ9JKX8 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.99□□□□□ -0.33
Upk3aQ9JKX8 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Upk3aQ9JKX8 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.99□□□□□ -0.33
Upk3aQ9JKX8 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.99□□□□□ -0.33
Upk3aQ9JKX8 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk3aQ9JKX8 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Upk3aQ9JKX8 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk3aQ9JKX8 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk3aQ9JKX8 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk3aQ9JKX8 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk3aQ9JKX8 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk3aQ9JKX8 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk3aQ9JKX8 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Upk3aQ9JKX8 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk3aQ9JKX8 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Upk3aQ9JKX8 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.99□□□□□ -0.33
Upk3aQ9JKX8 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk3aQ9JKX8 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Upk3aQ9JKX8 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Upk3aQ9JKX8 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Upk3aQ9JKX8 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.98□□□□□ -0.33
Upk3aQ9JKX8 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Upk3aQ9JKX8 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Upk3aQ9JKX8 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Upk3aQ9JKX8 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Upk3aQ9JKX8 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Upk3aQ9JKX8 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Upk3aQ9JKX8 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms