Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf111Q99ML9 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf111Q99ML9 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf111Q99ML9 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.15□□□□□ -0.3
Rnf111Q99ML9 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf111Q99ML9 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Rnf111Q99ML9 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Rnf111Q99ML9 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf111Q99ML9 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf111Q99ML9 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf111Q99ML9 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf111Q99ML9 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf111Q99ML9 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
Rnf111Q99ML9 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Rnf111Q99ML9 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Rnf111Q99ML9 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Rnf111Q99ML9 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Rnf111Q99ML9 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf111Q99ML9 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf111Q99ML9 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf111Q99ML9 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf111Q99ML9 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf111Q99ML9 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf111Q99ML9 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf111Q99ML9 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Rnf111Q99ML9 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf111Q99ML9 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.14□□□□□ -0.31
Rnf111Q99ML9 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf111Q99ML9 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf111Q99ML9 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.14□□□□□ -0.31
Rnf111Q99ML9 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.14□□□□□ -0.31
Rnf111Q99ML9 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf111Q99ML9 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf111Q99ML9 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf111Q99ML9 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf111Q99ML9 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.14□□□□□ -0.31
Rnf111Q99ML9 Gm37714-201ENSMUST00000194742 342 ntBASIC13.14□□□□□ -0.31
Rnf111Q99ML9 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.14□□□□□ -0.31
Rnf111Q99ML9 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.14□□□□□ -0.31
Rnf111Q99ML9 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf111Q99ML9 Gm9229-201ENSMUST00000222777 126 ntBASIC13.14□□□□□ -0.31
Rnf111Q99ML9 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.14□□□□□ -0.31
Rnf111Q99ML9 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf111Q99ML9 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf111Q99ML9 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf111Q99ML9 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf111Q99ML9 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf111Q99ML9 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf111Q99ML9 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf111Q99ML9 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf111Q99ML9 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.14□□□□□ -0.31
Rnf111Q99ML9 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf111Q99ML9 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf111Q99ML9 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Rnf111Q99ML9 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf111Q99ML9 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf111Q99ML9 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Rnf111Q99ML9 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.13□□□□□ -0.31
Rnf111Q99ML9 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Rnf111Q99ML9 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.13□□□□□ -0.31
Rnf111Q99ML9 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf111Q99ML9 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf111Q99ML9 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf111Q99ML9 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Rnf111Q99ML9 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf111Q99ML9 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Rnf111Q99ML9 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf111Q99ML9 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.13□□□□□ -0.31
Rnf111Q99ML9 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf111Q99ML9 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf111Q99ML9 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf111Q99ML9 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf111Q99ML9 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.13□□□□□ -0.31
Rnf111Q99ML9 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf111Q99ML9 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf111Q99ML9 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.13□□□□□ -0.31
Rnf111Q99ML9 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf111Q99ML9 Gm14057-201ENSMUST00000120631 482 ntBASIC13.13□□□□□ -0.31
Rnf111Q99ML9 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf111Q99ML9 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf111Q99ML9 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf111Q99ML9 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.13□□□□□ -0.31
Rnf111Q99ML9 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf111Q99ML9 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.13□□□□□ -0.31
Rnf111Q99ML9 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.13□□□□□ -0.31
Rnf111Q99ML9 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Rnf111Q99ML9 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf111Q99ML9 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf111Q99ML9 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Rnf111Q99ML9 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Rnf111Q99ML9 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf111Q99ML9 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf111Q99ML9 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.13□□□□□ -0.31
Rnf111Q99ML9 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf111Q99ML9 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf111Q99ML9 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.13□□□□□ -0.31
Rnf111Q99ML9 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf111Q99ML9 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf111Q99ML9 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf111Q99ML9 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms