Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Chmp1b1Q99LU0 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp1b1Q99LU0 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.83□□□□□ -0.36
Chmp1b1Q99LU0 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp1b1Q99LU0 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp1b1Q99LU0 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.83□□□□□ -0.36
Chmp1b1Q99LU0 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp1b1Q99LU0 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp1b1Q99LU0 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp1b1Q99LU0 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp1b1Q99LU0 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Chmp1b1Q99LU0 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.83□□□□□ -0.36
Chmp1b1Q99LU0 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp1b1Q99LU0 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp1b1Q99LU0 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp1b1Q99LU0 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp1b1Q99LU0 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp1b1Q99LU0 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Chmp1b1Q99LU0 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp1b1Q99LU0 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp1b1Q99LU0 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp1b1Q99LU0 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp1b1Q99LU0 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.82□□□□□ -0.36
Chmp1b1Q99LU0 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp1b1Q99LU0 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp1b1Q99LU0 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp1b1Q99LU0 Gm27680-201ENSMUST00000184192 160 ntBASIC12.82□□□□□ -0.36
Chmp1b1Q99LU0 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.82□□□□□ -0.36
Chmp1b1Q99LU0 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Chmp1b1Q99LU0 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp1b1Q99LU0 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp1b1Q99LU0 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp1b1Q99LU0 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp1b1Q99LU0 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp1b1Q99LU0 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp1b1Q99LU0 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp1b1Q99LU0 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Chmp1b1Q99LU0 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Chmp1b1Q99LU0 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp1b1Q99LU0 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.82□□□□□ -0.36
Chmp1b1Q99LU0 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Chmp1b1Q99LU0 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Chmp1b1Q99LU0 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Chmp1b1Q99LU0 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp1b1Q99LU0 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Chmp1b1Q99LU0 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp1b1Q99LU0 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp1b1Q99LU0 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp1b1Q99LU0 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp1b1Q99LU0 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp1b1Q99LU0 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.81□□□□□ -0.36
Chmp1b1Q99LU0 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp1b1Q99LU0 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp1b1Q99LU0 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp1b1Q99LU0 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp1b1Q99LU0 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp1b1Q99LU0 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp1b1Q99LU0 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp1b1Q99LU0 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp1b1Q99LU0 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp1b1Q99LU0 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.81□□□□□ -0.36
Chmp1b1Q99LU0 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp1b1Q99LU0 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp1b1Q99LU0 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp1b1Q99LU0 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp1b1Q99LU0 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp1b1Q99LU0 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp1b1Q99LU0 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Chmp1b1Q99LU0 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.81□□□□□ -0.36
Chmp1b1Q99LU0 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.81□□□□□ -0.36
Chmp1b1Q99LU0 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp1b1Q99LU0 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp1b1Q99LU0 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Chmp1b1Q99LU0 Gm27989-201ENSMUST00000184721 107 ntBASIC12.81□□□□□ -0.36
Chmp1b1Q99LU0 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.81□□□□□ -0.36
Chmp1b1Q99LU0 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp1b1Q99LU0 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp1b1Q99LU0 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.81□□□□□ -0.36
Chmp1b1Q99LU0 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp1b1Q99LU0 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Chmp1b1Q99LU0 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp1b1Q99LU0 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp1b1Q99LU0 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp1b1Q99LU0 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Chmp1b1Q99LU0 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp1b1Q99LU0 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp1b1Q99LU0 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.81□□□□□ -0.36
Chmp1b1Q99LU0 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp1b1Q99LU0 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp1b1Q99LU0 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp1b1Q99LU0 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp1b1Q99LU0 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp1b1Q99LU0 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp1b1Q99LU0 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp1b1Q99LU0 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp1b1Q99LU0 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp1b1Q99LU0 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp1b1Q99LU0 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chmp1b1Q99LU0 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.8□□□□□ -0.36
Chmp1b1Q99LU0 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms