Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Pcdha3Q91Y16 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.17□□□□□ -0.14
Pcdha3Q91Y16 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.17□□□□□ -0.14
Pcdha3Q91Y16 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha3Q91Y16 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha3Q91Y16 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14.17□□□□□ -0.14
Pcdha3Q91Y16 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha3Q91Y16 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha3Q91Y16 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha3Q91Y16 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha3Q91Y16 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha3Q91Y16 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha3Q91Y16 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Pcdha3Q91Y16 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha3Q91Y16 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha3Q91Y16 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha3Q91Y16 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha3Q91Y16 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha3Q91Y16 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Pcdha3Q91Y16 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Pcdha3Q91Y16 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Pcdha3Q91Y16 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha3Q91Y16 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha3Q91Y16 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha3Q91Y16 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha3Q91Y16 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdha3Q91Y16 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha3Q91Y16 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha3Q91Y16 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha3Q91Y16 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha3Q91Y16 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha3Q91Y16 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha3Q91Y16 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha3Q91Y16 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Pcdha3Q91Y16 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha3Q91Y16 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC14.16□□□□□ -0.14
Pcdha3Q91Y16 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.16□□□□□ -0.14
Pcdha3Q91Y16 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.16□□□□□ -0.14
Pcdha3Q91Y16 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Pcdha3Q91Y16 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha3Q91Y16 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha3Q91Y16 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.16□□□□□ -0.14
Pcdha3Q91Y16 Gm8515-201ENSMUST00000194852 576 ntBASIC14.16□□□□□ -0.14
Pcdha3Q91Y16 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Pcdha3Q91Y16 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC14.16□□□□□ -0.14
Pcdha3Q91Y16 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.16□□□□□ -0.14
Pcdha3Q91Y16 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha3Q91Y16 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha3Q91Y16 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha3Q91Y16 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha3Q91Y16 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Pcdha3Q91Y16 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha3Q91Y16 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha3Q91Y16 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha3Q91Y16 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha3Q91Y16 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha3Q91Y16 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Pcdha3Q91Y16 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha3Q91Y16 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha3Q91Y16 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Pcdha3Q91Y16 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha3Q91Y16 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha3Q91Y16 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha3Q91Y16 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha3Q91Y16 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha3Q91Y16 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha3Q91Y16 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha3Q91Y16 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha3Q91Y16 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha3Q91Y16 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Pcdha3Q91Y16 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha3Q91Y16 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha3Q91Y16 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.15□□□□□ -0.14
Pcdha3Q91Y16 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha3Q91Y16 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha3Q91Y16 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha3Q91Y16 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha3Q91Y16 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.15□□□□□ -0.14
Pcdha3Q91Y16 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha3Q91Y16 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha3Q91Y16 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.15□□□□□ -0.14
Pcdha3Q91Y16 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha3Q91Y16 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.15□□□□□ -0.14
Pcdha3Q91Y16 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.15□□□□□ -0.14
Pcdha3Q91Y16 Gm18018-201ENSMUST00000198273 408 ntBASIC14.15□□□□□ -0.14
Pcdha3Q91Y16 Gm18624-201ENSMUST00000220966 658 ntBASIC14.15□□□□□ -0.14
Pcdha3Q91Y16 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha3Q91Y16 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha3Q91Y16 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Pcdha3Q91Y16 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Pcdha3Q91Y16 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Pcdha3Q91Y16 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha3Q91Y16 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha3Q91Y16 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha3Q91Y16 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Pcdha3Q91Y16 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha3Q91Y16 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.15□□□□□ -0.14
Pcdha3Q91Y16 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Pcdha3Q91Y16 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha3Q91Y16 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms