Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.9□□□□□ -0.18
Pcdhb6Q91XZ4 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb6Q91XZ4 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb6Q91XZ4 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.9□□□□□ -0.18
Pcdhb6Q91XZ4 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.9□□□□□ -0.18
Pcdhb6Q91XZ4 Gm38144-201ENSMUST00000192790 465 ntBASIC13.9□□□□□ -0.18
Pcdhb6Q91XZ4 Gm44855-201ENSMUST00000205725 362 ntBASIC13.9□□□□□ -0.18
Pcdhb6Q91XZ4 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb6Q91XZ4 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Pcdhb6Q91XZ4 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb6Q91XZ4 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb6Q91XZ4 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb6Q91XZ4 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.9□□□□□ -0.18
Pcdhb6Q91XZ4 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.9□□□□□ -0.18
Pcdhb6Q91XZ4 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb6Q91XZ4 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb6Q91XZ4 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb6Q91XZ4 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb6Q91XZ4 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb6Q91XZ4 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Pcdhb6Q91XZ4 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb6Q91XZ4 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Pcdhb6Q91XZ4 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.9□□□□□ -0.18
Pcdhb6Q91XZ4 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Pcdhb6Q91XZ4 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.89□□□□□ -0.19
Pcdhb6Q91XZ4 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb6Q91XZ4 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Pcdhb6Q91XZ4 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb6Q91XZ4 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Pcdhb6Q91XZ4 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.89□□□□□ -0.19
Pcdhb6Q91XZ4 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
Pcdhb6Q91XZ4 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb6Q91XZ4 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.89□□□□□ -0.19
Pcdhb6Q91XZ4 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb6Q91XZ4 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb6Q91XZ4 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb6Q91XZ4 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb6Q91XZ4 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb6Q91XZ4 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
Pcdhb6Q91XZ4 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb6Q91XZ4 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.89□□□□□ -0.19
Pcdhb6Q91XZ4 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb6Q91XZ4 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.89□□□□□ -0.19
Pcdhb6Q91XZ4 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.89□□□□□ -0.19
Pcdhb6Q91XZ4 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb6Q91XZ4 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.89□□□□□ -0.19
Pcdhb6Q91XZ4 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb6Q91XZ4 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb6Q91XZ4 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb6Q91XZ4 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Pcdhb6Q91XZ4 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb6Q91XZ4 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb6Q91XZ4 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb6Q91XZ4 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb6Q91XZ4 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb6Q91XZ4 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb6Q91XZ4 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Pcdhb6Q91XZ4 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb6Q91XZ4 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.88□□□□□ -0.19
Pcdhb6Q91XZ4 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.88□□□□□ -0.19
Pcdhb6Q91XZ4 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb6Q91XZ4 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb6Q91XZ4 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb6Q91XZ4 Grk6-205ENSMUST00000224653 2976 ntBASIC13.88□□□□□ -0.19
Pcdhb6Q91XZ4 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb6Q91XZ4 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb6Q91XZ4 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Pcdhb6Q91XZ4 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb6Q91XZ4 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.88□□□□□ -0.19
Pcdhb6Q91XZ4 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb6Q91XZ4 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.88□□□□□ -0.19
Pcdhb6Q91XZ4 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb6Q91XZ4 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.88□□□□□ -0.19
Pcdhb6Q91XZ4 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb6Q91XZ4 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.88□□□□□ -0.19
Pcdhb6Q91XZ4 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC13.88□□□□□ -0.19
Pcdhb6Q91XZ4 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.88□□□□□ -0.19
Pcdhb6Q91XZ4 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
Pcdhb6Q91XZ4 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Pcdhb6Q91XZ4 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.88□□□□□ -0.19
Pcdhb6Q91XZ4 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Pcdhb6Q91XZ4 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Pcdhb6Q91XZ4 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.88□□□□□ -0.19
Pcdhb6Q91XZ4 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb6Q91XZ4 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb6Q91XZ4 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb6Q91XZ4 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb6Q91XZ4 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Pcdhb6Q91XZ4 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb6Q91XZ4 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb6Q91XZ4 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb6Q91XZ4 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb6Q91XZ4 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb6Q91XZ4 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb6Q91XZ4 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.87□□□□□ -0.19
Pcdhb6Q91XZ4 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb6Q91XZ4 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb6Q91XZ4 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb6Q91XZ4 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb6Q91XZ4 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms