Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga3Q91XY5 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Pcdhga3Q91XY5 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga3Q91XY5 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga3Q91XY5 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga3Q91XY5 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga3Q91XY5 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga3Q91XY5 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga3Q91XY5 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga3Q91XY5 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga3Q91XY5 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga3Q91XY5 Gm13223-201ENSMUST00000118609 747 ntBASIC12.1□□□□□ -0.47
Pcdhga3Q91XY5 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.1□□□□□ -0.47
Pcdhga3Q91XY5 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga3Q91XY5 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.1□□□□□ -0.47
Pcdhga3Q91XY5 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.1□□□□□ -0.47
Pcdhga3Q91XY5 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.1□□□□□ -0.47
Pcdhga3Q91XY5 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Pcdhga3Q91XY5 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.1□□□□□ -0.47
Pcdhga3Q91XY5 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Pcdhga3Q91XY5 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.1□□□□□ -0.47
Pcdhga3Q91XY5 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga3Q91XY5 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Pcdhga3Q91XY5 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga3Q91XY5 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.1□□□□□ -0.47
Pcdhga3Q91XY5 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Pcdhga3Q91XY5 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga3Q91XY5 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga3Q91XY5 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga3Q91XY5 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga3Q91XY5 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga3Q91XY5 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga3Q91XY5 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga3Q91XY5 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga3Q91XY5 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Pcdhga3Q91XY5 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhga3Q91XY5 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Pcdhga3Q91XY5 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhga3Q91XY5 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Pcdhga3Q91XY5 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhga3Q91XY5 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Pcdhga3Q91XY5 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Pcdhga3Q91XY5 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhga3Q91XY5 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhga3Q91XY5 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhga3Q91XY5 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Pcdhga3Q91XY5 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhga3Q91XY5 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhga3Q91XY5 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhga3Q91XY5 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhga3Q91XY5 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhga3Q91XY5 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.09□□□□□ -0.47
Pcdhga3Q91XY5 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.09□□□□□ -0.47
Pcdhga3Q91XY5 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC12.09□□□□□ -0.47
Pcdhga3Q91XY5 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhga3Q91XY5 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
Pcdhga3Q91XY5 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhga3Q91XY5 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhga3Q91XY5 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Pcdhga3Q91XY5 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhga3Q91XY5 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhga3Q91XY5 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Pcdhga3Q91XY5 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhga3Q91XY5 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhga3Q91XY5 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhga3Q91XY5 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhga3Q91XY5 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhga3Q91XY5 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhga3Q91XY5 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhga3Q91XY5 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhga3Q91XY5 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhga3Q91XY5 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Pcdhga3Q91XY5 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.09□□□□□ -0.47
Pcdhga3Q91XY5 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhga3Q91XY5 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Pcdhga3Q91XY5 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Pcdhga3Q91XY5 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhga3Q91XY5 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Pcdhga3Q91XY5 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhga3Q91XY5 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhga3Q91XY5 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Pcdhga3Q91XY5 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.08□□□□□ -0.48
Pcdhga3Q91XY5 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Pcdhga3Q91XY5 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhga3Q91XY5 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhga3Q91XY5 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhga3Q91XY5 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.08□□□□□ -0.48
Pcdhga3Q91XY5 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhga3Q91XY5 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhga3Q91XY5 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhga3Q91XY5 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.08□□□□□ -0.48
Pcdhga3Q91XY5 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhga3Q91XY5 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhga3Q91XY5 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhga3Q91XY5 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhga3Q91XY5 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhga3Q91XY5 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhga3Q91XY5 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhga3Q91XY5 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhga3Q91XY5 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms