Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.38□□□□□ -0.27
Pcdhga4Q91XY4 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Pcdhga4Q91XY4 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.38□□□□□ -0.27
Pcdhga4Q91XY4 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga4Q91XY4 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga4Q91XY4 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga4Q91XY4 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Pcdhga4Q91XY4 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga4Q91XY4 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Pcdhga4Q91XY4 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga4Q91XY4 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga4Q91XY4 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdhga4Q91XY4 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga4Q91XY4 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Pcdhga4Q91XY4 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga4Q91XY4 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga4Q91XY4 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdhga4Q91XY4 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga4Q91XY4 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga4Q91XY4 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdhga4Q91XY4 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga4Q91XY4 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga4Q91XY4 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga4Q91XY4 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga4Q91XY4 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga4Q91XY4 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga4Q91XY4 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga4Q91XY4 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.37□□□□□ -0.27
Pcdhga4Q91XY4 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Pcdhga4Q91XY4 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga4Q91XY4 Gm5354-201ENSMUST00000182417 973 ntBASIC13.37□□□□□ -0.27
Pcdhga4Q91XY4 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga4Q91XY4 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga4Q91XY4 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.37□□□□□ -0.27
Pcdhga4Q91XY4 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Pcdhga4Q91XY4 Gm15823-201ENSMUST00000064305 670 ntBASIC13.37□□□□□ -0.27
Pcdhga4Q91XY4 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Pcdhga4Q91XY4 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga4Q91XY4 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga4Q91XY4 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga4Q91XY4 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Pcdhga4Q91XY4 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdhga4Q91XY4 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga4Q91XY4 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga4Q91XY4 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga4Q91XY4 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga4Q91XY4 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga4Q91XY4 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Pcdhga4Q91XY4 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Pcdhga4Q91XY4 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga4Q91XY4 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga4Q91XY4 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga4Q91XY4 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Pcdhga4Q91XY4 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga4Q91XY4 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.36□□□□□ -0.27
Pcdhga4Q91XY4 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga4Q91XY4 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga4Q91XY4 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga4Q91XY4 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Pcdhga4Q91XY4 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga4Q91XY4 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga4Q91XY4 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga4Q91XY4 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga4Q91XY4 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga4Q91XY4 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga4Q91XY4 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga4Q91XY4 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Pcdhga4Q91XY4 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga4Q91XY4 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.36□□□□□ -0.27
Pcdhga4Q91XY4 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.36□□□□□ -0.27
Pcdhga4Q91XY4 Gm8515-201ENSMUST00000194852 576 ntBASIC13.36□□□□□ -0.27
Pcdhga4Q91XY4 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.36□□□□□ -0.27
Pcdhga4Q91XY4 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.36□□□□□ -0.27
Pcdhga4Q91XY4 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.36□□□□□ -0.27
Pcdhga4Q91XY4 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.36□□□□□ -0.27
Pcdhga4Q91XY4 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga4Q91XY4 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga4Q91XY4 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga4Q91XY4 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga4Q91XY4 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga4Q91XY4 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga4Q91XY4 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga4Q91XY4 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga4Q91XY4 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga4Q91XY4 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga4Q91XY4 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Pcdhga4Q91XY4 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga4Q91XY4 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga4Q91XY4 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga4Q91XY4 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga4Q91XY4 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga4Q91XY4 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga4Q91XY4 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhga4Q91XY4 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhga4Q91XY4 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhga4Q91XY4 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhga4Q91XY4 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.35□□□□□ -0.27
Pcdhga4Q91XY4 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhga4Q91XY4 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhga4Q91XY4 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms