Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TraipQ8VIG6 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
TraipQ8VIG6 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TraipQ8VIG6 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TraipQ8VIG6 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TraipQ8VIG6 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TraipQ8VIG6 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TraipQ8VIG6 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
TraipQ8VIG6 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TraipQ8VIG6 Abhd6-203ENSMUST00000225234 1958 ntBASIC14.4□□□□□ -0.1
TraipQ8VIG6 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TraipQ8VIG6 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TraipQ8VIG6 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.4□□□□□ -0.1
TraipQ8VIG6 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
TraipQ8VIG6 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
TraipQ8VIG6 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.11
TraipQ8VIG6 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.39□□□□□ -0.11
TraipQ8VIG6 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
TraipQ8VIG6 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.39□□□□□ -0.11
TraipQ8VIG6 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TraipQ8VIG6 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TraipQ8VIG6 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TraipQ8VIG6 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TraipQ8VIG6 Gm42449-201ENSMUST00000200349 2258 ntBASIC14.39□□□□□ -0.11
TraipQ8VIG6 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TraipQ8VIG6 Gm18630-201ENSMUST00000222109 1397 ntBASIC14.39□□□□□ -0.11
TraipQ8VIG6 Gm23931-201ENSMUST00000103842 109 ntBASIC14.39□□□□□ -0.11
TraipQ8VIG6 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TraipQ8VIG6 Gm14350-201ENSMUST00000116642 640 ntBASIC14.39□□□□□ -0.11
TraipQ8VIG6 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC14.39□□□□□ -0.11
TraipQ8VIG6 Gm2639-201ENSMUST00000156881 1297 ntBASIC14.39□□□□□ -0.11
TraipQ8VIG6 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TraipQ8VIG6 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TraipQ8VIG6 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
TraipQ8VIG6 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TraipQ8VIG6 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC14.39□□□□□ -0.11
TraipQ8VIG6 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC14.39□□□□□ -0.11
TraipQ8VIG6 AC140451.2-201ENSMUST00000228030 664 ntBASIC14.39□□□□□ -0.11
TraipQ8VIG6 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TraipQ8VIG6 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TraipQ8VIG6 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TraipQ8VIG6 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TraipQ8VIG6 Gm10478-201ENSMUST00000084451 396 ntBASIC14.39□□□□□ -0.11
TraipQ8VIG6 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TraipQ8VIG6 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.39□□□□□ -0.11
TraipQ8VIG6 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.39□□□□□ -0.11
TraipQ8VIG6 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TraipQ8VIG6 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
TraipQ8VIG6 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.39□□□□□ -0.11
TraipQ8VIG6 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TraipQ8VIG6 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
TraipQ8VIG6 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TraipQ8VIG6 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TraipQ8VIG6 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TraipQ8VIG6 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TraipQ8VIG6 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TraipQ8VIG6 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TraipQ8VIG6 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TraipQ8VIG6 Gm45684-201ENSMUST00000210244 1571 ntBASIC14.39□□□□□ -0.11
TraipQ8VIG6 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TraipQ8VIG6 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TraipQ8VIG6 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TraipQ8VIG6 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TraipQ8VIG6 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TraipQ8VIG6 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.38□□□□□ -0.11
TraipQ8VIG6 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.38□□□□□ -0.11
TraipQ8VIG6 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TraipQ8VIG6 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TraipQ8VIG6 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TraipQ8VIG6 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TraipQ8VIG6 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.38□□□□□ -0.11
TraipQ8VIG6 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC14.38□□□□□ -0.11
TraipQ8VIG6 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC14.38□□□□□ -0.11
TraipQ8VIG6 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TraipQ8VIG6 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
TraipQ8VIG6 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
TraipQ8VIG6 Gm27682-201ENSMUST00000183930 110 ntBASIC14.38□□□□□ -0.11
TraipQ8VIG6 Gm44069-201ENSMUST00000204898 506 ntBASIC14.38□□□□□ -0.11
TraipQ8VIG6 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC14.38□□□□□ -0.11
TraipQ8VIG6 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TraipQ8VIG6 Gm6991-201ENSMUST00000218475 1178 ntBASIC14.38□□□□□ -0.11
TraipQ8VIG6 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TraipQ8VIG6 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
TraipQ8VIG6 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
TraipQ8VIG6 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TraipQ8VIG6 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TraipQ8VIG6 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TraipQ8VIG6 Gm10339-203ENSMUST00000225409 1671 ntBASIC14.38□□□□□ -0.11
TraipQ8VIG6 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC14.38□□□□□ -0.11
TraipQ8VIG6 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TraipQ8VIG6 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TraipQ8VIG6 Gm26848-201ENSMUST00000181052 2467 ntTSL 5 BASIC14.38□□□□□ -0.11
TraipQ8VIG6 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TraipQ8VIG6 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TraipQ8VIG6 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TraipQ8VIG6 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TraipQ8VIG6 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TraipQ8VIG6 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TraipQ8VIG6 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TraipQ8VIG6 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms