Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.79□□□□□ -0.36
Clrn1Q8K445 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Clrn1Q8K445 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clrn1Q8K445 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clrn1Q8K445 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clrn1Q8K445 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clrn1Q8K445 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clrn1Q8K445 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Clrn1Q8K445 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clrn1Q8K445 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clrn1Q8K445 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clrn1Q8K445 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Clrn1Q8K445 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clrn1Q8K445 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Clrn1Q8K445 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clrn1Q8K445 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clrn1Q8K445 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clrn1Q8K445 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Clrn1Q8K445 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clrn1Q8K445 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clrn1Q8K445 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clrn1Q8K445 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Clrn1Q8K445 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.78□□□□□ -0.36
Clrn1Q8K445 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clrn1Q8K445 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clrn1Q8K445 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Clrn1Q8K445 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.78□□□□□ -0.36
Clrn1Q8K445 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clrn1Q8K445 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Clrn1Q8K445 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Clrn1Q8K445 Gm22189-201ENSMUST00000103822 86 ntBASIC12.78□□□□□ -0.36
Clrn1Q8K445 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.78□□□□□ -0.36
Clrn1Q8K445 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Clrn1Q8K445 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Clrn1Q8K445 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clrn1Q8K445 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.78□□□□□ -0.36
Clrn1Q8K445 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Clrn1Q8K445 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clrn1Q8K445 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Clrn1Q8K445 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Clrn1Q8K445 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clrn1Q8K445 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clrn1Q8K445 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Clrn1Q8K445 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clrn1Q8K445 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clrn1Q8K445 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.78□□□□□ -0.36
Clrn1Q8K445 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Clrn1Q8K445 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Clrn1Q8K445 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.78□□□□□ -0.36
Clrn1Q8K445 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clrn1Q8K445 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Clrn1Q8K445 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Clrn1Q8K445 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Clrn1Q8K445 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Clrn1Q8K445 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Clrn1Q8K445 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Clrn1Q8K445 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clrn1Q8K445 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clrn1Q8K445 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Clrn1Q8K445 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clrn1Q8K445 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Clrn1Q8K445 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Clrn1Q8K445 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Clrn1Q8K445 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clrn1Q8K445 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clrn1Q8K445 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Clrn1Q8K445 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clrn1Q8K445 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clrn1Q8K445 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clrn1Q8K445 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.77□□□□□ -0.37
Clrn1Q8K445 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clrn1Q8K445 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clrn1Q8K445 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clrn1Q8K445 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.77□□□□□ -0.37
Clrn1Q8K445 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clrn1Q8K445 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clrn1Q8K445 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clrn1Q8K445 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clrn1Q8K445 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Clrn1Q8K445 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clrn1Q8K445 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clrn1Q8K445 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Clrn1Q8K445 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clrn1Q8K445 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Clrn1Q8K445 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clrn1Q8K445 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clrn1Q8K445 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.76□□□□□ -0.37
Clrn1Q8K445 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Clrn1Q8K445 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Clrn1Q8K445 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Clrn1Q8K445 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.76□□□□□ -0.37
Clrn1Q8K445 Gm27437-201ENSMUST00000183429 107 ntBASIC12.76□□□□□ -0.37
Clrn1Q8K445 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clrn1Q8K445 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.76□□□□□ -0.37
Clrn1Q8K445 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.76□□□□□ -0.37
Clrn1Q8K445 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clrn1Q8K445 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clrn1Q8K445 Gm2423-201ENSMUST00000074863 733 ntBASIC12.76□□□□□ -0.37
Clrn1Q8K445 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.76□□□□□ -0.37
Clrn1Q8K445 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms