Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim9Q8C7M3 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim9Q8C7M3 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim9Q8C7M3 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim9Q8C7M3 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim9Q8C7M3 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.94□□□□□ -0.02
Trim9Q8C7M3 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.94□□□□□ -0.02
Trim9Q8C7M3 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trim9Q8C7M3 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trim9Q8C7M3 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trim9Q8C7M3 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim9Q8C7M3 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trim9Q8C7M3 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.93□□□□□ -0.02
Trim9Q8C7M3 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim9Q8C7M3 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim9Q8C7M3 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim9Q8C7M3 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim9Q8C7M3 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim9Q8C7M3 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim9Q8C7M3 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim9Q8C7M3 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.93□□□□□ -0.02
Trim9Q8C7M3 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim9Q8C7M3 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim9Q8C7M3 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Trim9Q8C7M3 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.93□□□□□ -0.02
Trim9Q8C7M3 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim9Q8C7M3 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.93□□□□□ -0.02
Trim9Q8C7M3 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim9Q8C7M3 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim9Q8C7M3 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim9Q8C7M3 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trim9Q8C7M3 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.93□□□□□ -0.02
Trim9Q8C7M3 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim9Q8C7M3 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trim9Q8C7M3 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim9Q8C7M3 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim9Q8C7M3 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim9Q8C7M3 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC14.92□□□□□ -0.02
Trim9Q8C7M3 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim9Q8C7M3 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim9Q8C7M3 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim9Q8C7M3 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC14.92□□□□□ -0.02
Trim9Q8C7M3 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim9Q8C7M3 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim9Q8C7M3 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim9Q8C7M3 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Trim9Q8C7M3 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim9Q8C7M3 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim9Q8C7M3 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim9Q8C7M3 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim9Q8C7M3 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim9Q8C7M3 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trim9Q8C7M3 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim9Q8C7M3 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.92□□□□□ -0.02
Trim9Q8C7M3 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim9Q8C7M3 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim9Q8C7M3 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim9Q8C7M3 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim9Q8C7M3 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trim9Q8C7M3 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim9Q8C7M3 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim9Q8C7M3 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim9Q8C7M3 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim9Q8C7M3 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim9Q8C7M3 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim9Q8C7M3 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim9Q8C7M3 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim9Q8C7M3 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim9Q8C7M3 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim9Q8C7M3 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trim9Q8C7M3 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim9Q8C7M3 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trim9Q8C7M3 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim9Q8C7M3 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
Trim9Q8C7M3 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim9Q8C7M3 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim9Q8C7M3 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim9Q8C7M3 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim9Q8C7M3 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim9Q8C7M3 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim9Q8C7M3 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Trim9Q8C7M3 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.91□□□□□ -0.02
Trim9Q8C7M3 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim9Q8C7M3 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
Trim9Q8C7M3 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim9Q8C7M3 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim9Q8C7M3 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.91□□□□□ -0.02
Trim9Q8C7M3 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC14.91□□□□□ -0.02
Trim9Q8C7M3 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim9Q8C7M3 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim9Q8C7M3 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim9Q8C7M3 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.91□□□□□ -0.02
Trim9Q8C7M3 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim9Q8C7M3 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim9Q8C7M3 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim9Q8C7M3 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim9Q8C7M3 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim9Q8C7M3 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Trim9Q8C7M3 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim9Q8C7M3 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms