Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sh3rf3Q8C120 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sh3rf3Q8C120 Gm6473-201ENSMUST00000188572 1210 ntBASIC14.12□□□□□ -0.15
Sh3rf3Q8C120 Gm42612-201ENSMUST00000197986 623 ntBASIC14.12□□□□□ -0.15
Sh3rf3Q8C120 Gm43170-201ENSMUST00000199827 612 ntBASIC14.12□□□□□ -0.15
Sh3rf3Q8C120 Gm6218-201ENSMUST00000219812 628 ntBASIC14.12□□□□□ -0.15
Sh3rf3Q8C120 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.12□□□□□ -0.15
Sh3rf3Q8C120 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.12□□□□□ -0.15
Sh3rf3Q8C120 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sh3rf3Q8C120 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sh3rf3Q8C120 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sh3rf3Q8C120 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sh3rf3Q8C120 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sh3rf3Q8C120 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.12□□□□□ -0.15
Sh3rf3Q8C120 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Sh3rf3Q8C120 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Sh3rf3Q8C120 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sh3rf3Q8C120 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sh3rf3Q8C120 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sh3rf3Q8C120 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sh3rf3Q8C120 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sh3rf3Q8C120 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sh3rf3Q8C120 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sh3rf3Q8C120 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sh3rf3Q8C120 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sh3rf3Q8C120 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sh3rf3Q8C120 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sh3rf3Q8C120 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sh3rf3Q8C120 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.12□□□□□ -0.15
Sh3rf3Q8C120 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sh3rf3Q8C120 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sh3rf3Q8C120 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.11□□□□□ -0.15
Sh3rf3Q8C120 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sh3rf3Q8C120 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sh3rf3Q8C120 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sh3rf3Q8C120 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Sh3rf3Q8C120 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Sh3rf3Q8C120 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sh3rf3Q8C120 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sh3rf3Q8C120 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Sh3rf3Q8C120 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sh3rf3Q8C120 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sh3rf3Q8C120 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.11□□□□□ -0.15
Sh3rf3Q8C120 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.11□□□□□ -0.15
Sh3rf3Q8C120 Gm44855-201ENSMUST00000205725 362 ntBASIC14.11□□□□□ -0.15
Sh3rf3Q8C120 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sh3rf3Q8C120 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Sh3rf3Q8C120 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sh3rf3Q8C120 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sh3rf3Q8C120 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sh3rf3Q8C120 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.11□□□□□ -0.15
Sh3rf3Q8C120 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Sh3rf3Q8C120 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sh3rf3Q8C120 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Sh3rf3Q8C120 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sh3rf3Q8C120 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Sh3rf3Q8C120 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sh3rf3Q8C120 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sh3rf3Q8C120 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sh3rf3Q8C120 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sh3rf3Q8C120 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.11□□□□□ -0.15
Sh3rf3Q8C120 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sh3rf3Q8C120 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sh3rf3Q8C120 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sh3rf3Q8C120 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Sh3rf3Q8C120 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.1□□□□□ -0.15
Sh3rf3Q8C120 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sh3rf3Q8C120 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sh3rf3Q8C120 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.1□□□□□ -0.15
Sh3rf3Q8C120 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Sh3rf3Q8C120 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sh3rf3Q8C120 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sh3rf3Q8C120 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sh3rf3Q8C120 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sh3rf3Q8C120 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sh3rf3Q8C120 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sh3rf3Q8C120 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.1□□□□□ -0.15
Sh3rf3Q8C120 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC14.1□□□□□ -0.15
Sh3rf3Q8C120 Gm7730-201ENSMUST00000212486 454 ntBASIC14.1□□□□□ -0.15
Sh3rf3Q8C120 AC125206.2-201ENSMUST00000217454 574 ntBASIC14.1□□□□□ -0.15
Sh3rf3Q8C120 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.1□□□□□ -0.15
Sh3rf3Q8C120 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sh3rf3Q8C120 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sh3rf3Q8C120 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sh3rf3Q8C120 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Sh3rf3Q8C120 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sh3rf3Q8C120 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.1□□□□□ -0.15
Sh3rf3Q8C120 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sh3rf3Q8C120 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sh3rf3Q8C120 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sh3rf3Q8C120 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Sh3rf3Q8C120 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sh3rf3Q8C120 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sh3rf3Q8C120 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sh3rf3Q8C120 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sh3rf3Q8C120 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sh3rf3Q8C120 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Sh3rf3Q8C120 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sh3rf3Q8C120 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sh3rf3Q8C120 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms