Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.7□□□□□ -0.22
Sh3rf2Q8BZT2 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sh3rf2Q8BZT2 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh3rf2Q8BZT2 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Sh3rf2Q8BZT2 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh3rf2Q8BZT2 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh3rf2Q8BZT2 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Sh3rf2Q8BZT2 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.69□□□□□ -0.22
Sh3rf2Q8BZT2 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sh3rf2Q8BZT2 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sh3rf2Q8BZT2 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sh3rf2Q8BZT2 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sh3rf2Q8BZT2 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sh3rf2Q8BZT2 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Sh3rf2Q8BZT2 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Sh3rf2Q8BZT2 Gm6007-201ENSMUST00000208170 823 ntBASIC13.69□□□□□ -0.22
Sh3rf2Q8BZT2 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.69□□□□□ -0.22
Sh3rf2Q8BZT2 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.69□□□□□ -0.22
Sh3rf2Q8BZT2 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.69□□□□□ -0.22
Sh3rf2Q8BZT2 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sh3rf2Q8BZT2 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Sh3rf2Q8BZT2 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sh3rf2Q8BZT2 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sh3rf2Q8BZT2 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sh3rf2Q8BZT2 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sh3rf2Q8BZT2 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sh3rf2Q8BZT2 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sh3rf2Q8BZT2 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sh3rf2Q8BZT2 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Sh3rf2Q8BZT2 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sh3rf2Q8BZT2 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Sh3rf2Q8BZT2 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sh3rf2Q8BZT2 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
Sh3rf2Q8BZT2 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sh3rf2Q8BZT2 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.69□□□□□ -0.22
Sh3rf2Q8BZT2 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Sh3rf2Q8BZT2 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
Sh3rf2Q8BZT2 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sh3rf2Q8BZT2 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sh3rf2Q8BZT2 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Sh3rf2Q8BZT2 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sh3rf2Q8BZT2 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sh3rf2Q8BZT2 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sh3rf2Q8BZT2 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.68□□□□□ -0.22
Sh3rf2Q8BZT2 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sh3rf2Q8BZT2 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sh3rf2Q8BZT2 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
Sh3rf2Q8BZT2 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sh3rf2Q8BZT2 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sh3rf2Q8BZT2 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sh3rf2Q8BZT2 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sh3rf2Q8BZT2 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sh3rf2Q8BZT2 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sh3rf2Q8BZT2 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sh3rf2Q8BZT2 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sh3rf2Q8BZT2 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Sh3rf2Q8BZT2 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.68□□□□□ -0.22
Sh3rf2Q8BZT2 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Sh3rf2Q8BZT2 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sh3rf2Q8BZT2 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.68□□□□□ -0.22
Sh3rf2Q8BZT2 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.68□□□□□ -0.22
Sh3rf2Q8BZT2 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sh3rf2Q8BZT2 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sh3rf2Q8BZT2 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sh3rf2Q8BZT2 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Sh3rf2Q8BZT2 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Sh3rf2Q8BZT2 Gm10478-201ENSMUST00000084451 396 ntBASIC13.68□□□□□ -0.22
Sh3rf2Q8BZT2 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sh3rf2Q8BZT2 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sh3rf2Q8BZT2 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Sh3rf2Q8BZT2 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sh3rf2Q8BZT2 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sh3rf2Q8BZT2 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Sh3rf2Q8BZT2 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Sh3rf2Q8BZT2 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sh3rf2Q8BZT2 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Sh3rf2Q8BZT2 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Sh3rf2Q8BZT2 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sh3rf2Q8BZT2 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sh3rf2Q8BZT2 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sh3rf2Q8BZT2 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Sh3rf2Q8BZT2 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sh3rf2Q8BZT2 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sh3rf2Q8BZT2 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.67□□□□□ -0.22
Sh3rf2Q8BZT2 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sh3rf2Q8BZT2 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sh3rf2Q8BZT2 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sh3rf2Q8BZT2 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.67□□□□□ -0.22
Sh3rf2Q8BZT2 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sh3rf2Q8BZT2 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.67□□□□□ -0.22
Sh3rf2Q8BZT2 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sh3rf2Q8BZT2 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.67□□□□□ -0.22
Sh3rf2Q8BZT2 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Sh3rf2Q8BZT2 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.67□□□□□ -0.22
Sh3rf2Q8BZT2 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sh3rf2Q8BZT2 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.67□□□□□ -0.22
Sh3rf2Q8BZT2 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sh3rf2Q8BZT2 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sh3rf2Q8BZT2 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Sh3rf2Q8BZT2 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms