Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp54Q8BL06 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp54Q8BL06 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp54Q8BL06 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp54Q8BL06 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Usp54Q8BL06 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp54Q8BL06 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp54Q8BL06 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp54Q8BL06 Gm14277-201ENSMUST00000121195 360 ntBASIC18.88■□□□□ 0.61
Usp54Q8BL06 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Usp54Q8BL06 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
Usp54Q8BL06 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC18.88■□□□□ 0.61
Usp54Q8BL06 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp54Q8BL06 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Usp54Q8BL06 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Usp54Q8BL06 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp54Q8BL06 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp54Q8BL06 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Usp54Q8BL06 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp54Q8BL06 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp54Q8BL06 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC18.87■□□□□ 0.61
Usp54Q8BL06 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Usp54Q8BL06 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp54Q8BL06 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Usp54Q8BL06 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Usp54Q8BL06 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Usp54Q8BL06 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Usp54Q8BL06 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Usp54Q8BL06 Mir7221-201ENSMUST00000184009 72 ntBASIC18.87■□□□□ 0.61
Usp54Q8BL06 Ighv5-7-201ENSMUST00000192302 244 ntBASIC18.87■□□□□ 0.61
Usp54Q8BL06 Gm44262-201ENSMUST00000204969 372 ntBASIC18.87■□□□□ 0.61
Usp54Q8BL06 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp54Q8BL06 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp54Q8BL06 Gm14371-201ENSMUST00000138925 1518 ntBASIC18.87■□□□□ 0.61
Usp54Q8BL06 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Usp54Q8BL06 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp54Q8BL06 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Usp54Q8BL06 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC18.87■□□□□ 0.61
Usp54Q8BL06 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Usp54Q8BL06 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp54Q8BL06 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp54Q8BL06 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp54Q8BL06 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp54Q8BL06 Gm28182-201ENSMUST00000188354 2477 ntBASIC18.87■□□□□ 0.61
Usp54Q8BL06 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Usp54Q8BL06 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp54Q8BL06 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp54Q8BL06 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp54Q8BL06 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp54Q8BL06 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Usp54Q8BL06 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
Usp54Q8BL06 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Usp54Q8BL06 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC18.86■□□□□ 0.61
Usp54Q8BL06 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC18.86■□□□□ 0.61
Usp54Q8BL06 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC18.86■□□□□ 0.61
Usp54Q8BL06 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Usp54Q8BL06 Gm23363-201ENSMUST00000175024 79 ntBASIC18.86■□□□□ 0.61
Usp54Q8BL06 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC18.86■□□□□ 0.61
Usp54Q8BL06 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC18.86■□□□□ 0.61
Usp54Q8BL06 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC18.86■□□□□ 0.61
Usp54Q8BL06 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC18.86■□□□□ 0.61
Usp54Q8BL06 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC18.86■□□□□ 0.61
Usp54Q8BL06 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
Usp54Q8BL06 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC18.86■□□□□ 0.61
Usp54Q8BL06 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp54Q8BL06 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp54Q8BL06 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp54Q8BL06 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Usp54Q8BL06 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Usp54Q8BL06 AC154725.1-201ENSMUST00000224826 1961 ntBASIC18.86■□□□□ 0.61
Usp54Q8BL06 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC18.86■□□□□ 0.61
Usp54Q8BL06 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp54Q8BL06 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp54Q8BL06 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Usp54Q8BL06 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Usp54Q8BL06 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Usp54Q8BL06 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp54Q8BL06 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp54Q8BL06 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp54Q8BL06 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Usp54Q8BL06 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp54Q8BL06 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Usp54Q8BL06 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Usp54Q8BL06 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC18.85■□□□□ 0.61
Usp54Q8BL06 Gm3096-201ENSMUST00000185770 364 ntBASIC18.85■□□□□ 0.61
Usp54Q8BL06 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC18.85■□□□□ 0.61
Usp54Q8BL06 Gm43416-201ENSMUST00000201916 1015 ntBASIC18.85■□□□□ 0.61
Usp54Q8BL06 Gm43947-201ENSMUST00000203019 959 ntBASIC18.85■□□□□ 0.61
Usp54Q8BL06 Gm8712-201ENSMUST00000221090 701 ntBASIC18.85■□□□□ 0.61
Usp54Q8BL06 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC18.85■□□□□ 0.61
Usp54Q8BL06 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp54Q8BL06 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC18.85■□□□□ 0.61
Usp54Q8BL06 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp54Q8BL06 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp54Q8BL06 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp54Q8BL06 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Usp54Q8BL06 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC18.85■□□□□ 0.61
Usp54Q8BL06 Gm9333-201ENSMUST00000205452 1323 ntBASIC18.85■□□□□ 0.61
Usp54Q8BL06 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp54Q8BL06 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms