Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Gm6218-201ENSMUST00000219812 628 ntBASIC13.2□□□□□ -0.3
Trim50Q810I2 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim50Q810I2 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim50Q810I2 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trim50Q810I2 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim50Q810I2 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim50Q810I2 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim50Q810I2 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim50Q810I2 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim50Q810I2 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim50Q810I2 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim50Q810I2 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim50Q810I2 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
Trim50Q810I2 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim50Q810I2 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trim50Q810I2 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trim50Q810I2 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim50Q810I2 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim50Q810I2 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trim50Q810I2 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trim50Q810I2 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.2□□□□□ -0.3
Trim50Q810I2 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim50Q810I2 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim50Q810I2 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim50Q810I2 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim50Q810I2 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.19□□□□□ -0.3
Trim50Q810I2 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.19□□□□□ -0.3
Trim50Q810I2 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim50Q810I2 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim50Q810I2 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.19□□□□□ -0.3
Trim50Q810I2 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim50Q810I2 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim50Q810I2 Gm15770-201ENSMUST00000117498 584 ntBASIC13.19□□□□□ -0.3
Trim50Q810I2 Gm27437-201ENSMUST00000183429 107 ntBASIC13.19□□□□□ -0.3
Trim50Q810I2 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC13.19□□□□□ -0.3
Trim50Q810I2 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.19□□□□□ -0.3
Trim50Q810I2 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim50Q810I2 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.19□□□□□ -0.3
Trim50Q810I2 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.19□□□□□ -0.3
Trim50Q810I2 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim50Q810I2 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim50Q810I2 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim50Q810I2 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim50Q810I2 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim50Q810I2 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.19□□□□□ -0.3
Trim50Q810I2 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim50Q810I2 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim50Q810I2 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim50Q810I2 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim50Q810I2 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Trim50Q810I2 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim50Q810I2 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim50Q810I2 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim50Q810I2 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trim50Q810I2 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim50Q810I2 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Trim50Q810I2 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim50Q810I2 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim50Q810I2 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim50Q810I2 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim50Q810I2 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim50Q810I2 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim50Q810I2 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim50Q810I2 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim50Q810I2 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim50Q810I2 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim50Q810I2 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim50Q810I2 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trim50Q810I2 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trim50Q810I2 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.18□□□□□ -0.3
Trim50Q810I2 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim50Q810I2 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.18□□□□□ -0.3
Trim50Q810I2 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trim50Q810I2 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim50Q810I2 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.18□□□□□ -0.3
Trim50Q810I2 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim50Q810I2 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.18□□□□□ -0.3
Trim50Q810I2 Gm2423-201ENSMUST00000074863 733 ntBASIC13.18□□□□□ -0.3
Trim50Q810I2 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.18□□□□□ -0.3
Trim50Q810I2 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim50Q810I2 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.18□□□□□ -0.3
Trim50Q810I2 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim50Q810I2 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim50Q810I2 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim50Q810I2 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim50Q810I2 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim50Q810I2 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Trim50Q810I2 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim50Q810I2 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim50Q810I2 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim50Q810I2 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim50Q810I2 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim50Q810I2 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim50Q810I2 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim50Q810I2 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trim50Q810I2 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim50Q810I2 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim50Q810I2 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim50Q810I2 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trim50Q810I2 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms