Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rif1Q6PR54 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Rif1Q6PR54 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rif1Q6PR54 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rif1Q6PR54 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rif1Q6PR54 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rif1Q6PR54 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rif1Q6PR54 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rif1Q6PR54 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rif1Q6PR54 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC11.39□□□□□ -0.59
Rif1Q6PR54 Gm4862-201ENSMUST00000170405 438 ntBASIC11.39□□□□□ -0.59
Rif1Q6PR54 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rif1Q6PR54 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rif1Q6PR54 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Rif1Q6PR54 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Rif1Q6PR54 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.39□□□□□ -0.59
Rif1Q6PR54 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Rif1Q6PR54 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.39□□□□□ -0.59
Rif1Q6PR54 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Rif1Q6PR54 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Rif1Q6PR54 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rif1Q6PR54 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rif1Q6PR54 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rif1Q6PR54 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rif1Q6PR54 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rif1Q6PR54 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rif1Q6PR54 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Rif1Q6PR54 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rif1Q6PR54 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rif1Q6PR54 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rif1Q6PR54 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rif1Q6PR54 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rif1Q6PR54 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Rif1Q6PR54 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Rif1Q6PR54 Gm17040-202ENSMUST00000170597 889 ntBASIC11.38□□□□□ -0.59
Rif1Q6PR54 Gm27552-201ENSMUST00000183351 62 ntBASIC11.38□□□□□ -0.59
Rif1Q6PR54 Gm27844-201ENSMUST00000183613 62 ntBASIC11.38□□□□□ -0.59
Rif1Q6PR54 Gm44405-201ENSMUST00000198952 126 ntBASIC11.38□□□□□ -0.59
Rif1Q6PR54 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.38□□□□□ -0.59
Rif1Q6PR54 CT009713.8-202ENSMUST00000224732 385 ntBASIC11.38□□□□□ -0.59
Rif1Q6PR54 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rif1Q6PR54 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Rif1Q6PR54 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rif1Q6PR54 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rif1Q6PR54 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rif1Q6PR54 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rif1Q6PR54 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rif1Q6PR54 AC161252.3-201ENSMUST00000225465 1549 ntBASIC11.38□□□□□ -0.59
Rif1Q6PR54 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rif1Q6PR54 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.38□□□□□ -0.59
Rif1Q6PR54 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rif1Q6PR54 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Rif1Q6PR54 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
Rif1Q6PR54 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rif1Q6PR54 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC11.38□□□□□ -0.59
Rif1Q6PR54 Gm12036-201ENSMUST00000120008 530 ntBASIC11.38□□□□□ -0.59
Rif1Q6PR54 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC11.38□□□□□ -0.59
Rif1Q6PR54 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.38□□□□□ -0.59
Rif1Q6PR54 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rif1Q6PR54 Gm44262-201ENSMUST00000204969 372 ntBASIC11.38□□□□□ -0.59
Rif1Q6PR54 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Rif1Q6PR54 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC11.38□□□□□ -0.59
Rif1Q6PR54 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rif1Q6PR54 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rif1Q6PR54 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.38□□□□□ -0.59
Rif1Q6PR54 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rif1Q6PR54 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
Rif1Q6PR54 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rif1Q6PR54 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
Rif1Q6PR54 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC11.38□□□□□ -0.59
Rif1Q6PR54 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rif1Q6PR54 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rif1Q6PR54 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC11.37□□□□□ -0.59
Rif1Q6PR54 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rif1Q6PR54 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rif1Q6PR54 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rif1Q6PR54 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rif1Q6PR54 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rif1Q6PR54 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rif1Q6PR54 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Rif1Q6PR54 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rif1Q6PR54 Tsc22d1-207ENSMUST00000140251 670 ntTSL 2 BASIC11.37□□□□□ -0.59
Rif1Q6PR54 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rif1Q6PR54 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Rif1Q6PR54 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rif1Q6PR54 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rif1Q6PR54 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rif1Q6PR54 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC11.37□□□□□ -0.59
Rif1Q6PR54 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rif1Q6PR54 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.37□□□□□ -0.59
Rif1Q6PR54 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC11.37□□□□□ -0.59
Rif1Q6PR54 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rif1Q6PR54 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC11.37□□□□□ -0.59
Rif1Q6PR54 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rif1Q6PR54 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rif1Q6PR54 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC11.37□□□□□ -0.59
Rif1Q6PR54 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rif1Q6PR54 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rif1Q6PR54 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Rif1Q6PR54 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms