Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Nup98Q6PFD9 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC15.68■□□□□ 0.1
Nup98Q6PFD9 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC15.68■□□□□ 0.1
Nup98Q6PFD9 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nup98Q6PFD9 Gm23363-201ENSMUST00000175024 79 ntBASIC15.68■□□□□ 0.1
Nup98Q6PFD9 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.68■□□□□ 0.1
Nup98Q6PFD9 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nup98Q6PFD9 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC15.68■□□□□ 0.1
Nup98Q6PFD9 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
Nup98Q6PFD9 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nup98Q6PFD9 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nup98Q6PFD9 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nup98Q6PFD9 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC15.68■□□□□ 0.1
Nup98Q6PFD9 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Nup98Q6PFD9 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup98Q6PFD9 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup98Q6PFD9 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
Nup98Q6PFD9 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nup98Q6PFD9 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC15.67■□□□□ 0.1
Nup98Q6PFD9 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup98Q6PFD9 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup98Q6PFD9 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup98Q6PFD9 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup98Q6PFD9 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup98Q6PFD9 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup98Q6PFD9 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup98Q6PFD9 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC15.67■□□□□ 0.1
Nup98Q6PFD9 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup98Q6PFD9 Gm25214-201ENSMUST00000104573 129 ntBASIC15.67■□□□□ 0.1
Nup98Q6PFD9 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nup98Q6PFD9 Gm18916-201ENSMUST00000198264 1246 ntBASIC15.67■□□□□ 0.1
Nup98Q6PFD9 Gm19931-201ENSMUST00000198920 368 ntBASIC15.67■□□□□ 0.1
Nup98Q6PFD9 Gm7118-201ENSMUST00000200167 1003 ntBASIC15.67■□□□□ 0.1
Nup98Q6PFD9 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC15.67■□□□□ 0.1
Nup98Q6PFD9 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup98Q6PFD9 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC15.67■□□□□ 0.1
Nup98Q6PFD9 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup98Q6PFD9 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup98Q6PFD9 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC15.67■□□□□ 0.1
Nup98Q6PFD9 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup98Q6PFD9 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup98Q6PFD9 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup98Q6PFD9 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup98Q6PFD9 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nup98Q6PFD9 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Nup98Q6PFD9 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup98Q6PFD9 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup98Q6PFD9 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup98Q6PFD9 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup98Q6PFD9 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup98Q6PFD9 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Nup98Q6PFD9 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup98Q6PFD9 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC15.66■□□□□ 0.1
Nup98Q6PFD9 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup98Q6PFD9 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup98Q6PFD9 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC15.66■□□□□ 0.1
Nup98Q6PFD9 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nup98Q6PFD9 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC15.66■□□□□ 0.1
Nup98Q6PFD9 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nup98Q6PFD9 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC15.66■□□□□ 0.1
Nup98Q6PFD9 Gm4857-201ENSMUST00000192718 785 ntBASIC15.66■□□□□ 0.1
Nup98Q6PFD9 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nup98Q6PFD9 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Nup98Q6PFD9 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup98Q6PFD9 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup98Q6PFD9 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup98Q6PFD9 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup98Q6PFD9 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Nup98Q6PFD9 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup98Q6PFD9 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup98Q6PFD9 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup98Q6PFD9 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup98Q6PFD9 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup98Q6PFD9 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup98Q6PFD9 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup98Q6PFD9 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
Nup98Q6PFD9 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Nup98Q6PFD9 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC15.66■□□□□ 0.1
Nup98Q6PFD9 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC15.66■□□□□ 0.1
Nup98Q6PFD9 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nup98Q6PFD9 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC15.66■□□□□ 0.1
Nup98Q6PFD9 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Nup98Q6PFD9 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Nup98Q6PFD9 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup98Q6PFD9 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup98Q6PFD9 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup98Q6PFD9 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nup98Q6PFD9 Gm15459-201ENSMUST00000117405 1941 ntBASIC15.65■□□□□ 0.1
Nup98Q6PFD9 Gm8355-201ENSMUST00000177767 1941 ntBASIC15.65■□□□□ 0.1
Nup98Q6PFD9 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nup98Q6PFD9 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup98Q6PFD9 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Nup98Q6PFD9 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup98Q6PFD9 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup98Q6PFD9 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup98Q6PFD9 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup98Q6PFD9 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nup98Q6PFD9 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Nup98Q6PFD9 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup98Q6PFD9 Gm17376-201ENSMUST00000166016 84 ntBASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms