Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.4□□□□□ -0.1
CtifQ6PEE2 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CtifQ6PEE2 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.4□□□□□ -0.1
CtifQ6PEE2 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.4□□□□□ -0.1
CtifQ6PEE2 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CtifQ6PEE2 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.4□□□□□ -0.1
CtifQ6PEE2 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CtifQ6PEE2 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CtifQ6PEE2 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CtifQ6PEE2 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CtifQ6PEE2 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CtifQ6PEE2 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.4□□□□□ -0.1
CtifQ6PEE2 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CtifQ6PEE2 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CtifQ6PEE2 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
CtifQ6PEE2 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
CtifQ6PEE2 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CtifQ6PEE2 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CtifQ6PEE2 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CtifQ6PEE2 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CtifQ6PEE2 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CtifQ6PEE2 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CtifQ6PEE2 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CtifQ6PEE2 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CtifQ6PEE2 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CtifQ6PEE2 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
CtifQ6PEE2 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CtifQ6PEE2 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CtifQ6PEE2 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CtifQ6PEE2 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CtifQ6PEE2 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CtifQ6PEE2 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CtifQ6PEE2 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC14.39□□□□□ -0.11
CtifQ6PEE2 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CtifQ6PEE2 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CtifQ6PEE2 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.39□□□□□ -0.11
CtifQ6PEE2 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CtifQ6PEE2 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CtifQ6PEE2 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CtifQ6PEE2 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CtifQ6PEE2 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CtifQ6PEE2 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CtifQ6PEE2 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC14.39□□□□□ -0.11
CtifQ6PEE2 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CtifQ6PEE2 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CtifQ6PEE2 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CtifQ6PEE2 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CtifQ6PEE2 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.39□□□□□ -0.11
CtifQ6PEE2 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CtifQ6PEE2 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
CtifQ6PEE2 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.39□□□□□ -0.11
CtifQ6PEE2 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CtifQ6PEE2 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CtifQ6PEE2 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.39□□□□□ -0.11
CtifQ6PEE2 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CtifQ6PEE2 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CtifQ6PEE2 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CtifQ6PEE2 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CtifQ6PEE2 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CtifQ6PEE2 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CtifQ6PEE2 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CtifQ6PEE2 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CtifQ6PEE2 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
CtifQ6PEE2 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC14.39□□□□□ -0.11
CtifQ6PEE2 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CtifQ6PEE2 AC157950.1-201ENSMUST00000217561 2168 ntBASIC14.39□□□□□ -0.11
CtifQ6PEE2 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CtifQ6PEE2 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CtifQ6PEE2 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtifQ6PEE2 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtifQ6PEE2 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtifQ6PEE2 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.38□□□□□ -0.11
CtifQ6PEE2 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtifQ6PEE2 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC14.38□□□□□ -0.11
CtifQ6PEE2 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtifQ6PEE2 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CtifQ6PEE2 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC14.38□□□□□ -0.11
CtifQ6PEE2 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtifQ6PEE2 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtifQ6PEE2 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC14.38□□□□□ -0.11
CtifQ6PEE2 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtifQ6PEE2 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtifQ6PEE2 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC14.38□□□□□ -0.11
CtifQ6PEE2 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtifQ6PEE2 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtifQ6PEE2 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CtifQ6PEE2 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
CtifQ6PEE2 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.38□□□□□ -0.11
CtifQ6PEE2 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.38□□□□□ -0.11
CtifQ6PEE2 Gm13418-201ENSMUST00000119097 944 ntBASIC14.38□□□□□ -0.11
CtifQ6PEE2 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.38□□□□□ -0.11
CtifQ6PEE2 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CtifQ6PEE2 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CtifQ6PEE2 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.38□□□□□ -0.11
CtifQ6PEE2 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.38□□□□□ -0.11
CtifQ6PEE2 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtifQ6PEE2 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtifQ6PEE2 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtifQ6PEE2 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtifQ6PEE2 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms