Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Clcn1Q64347 Gm43822-201ENSMUST00000200285 476 ntBASIC17.13■□□□□ 0.33
Clcn1Q64347 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC17.13■□□□□ 0.33
Clcn1Q64347 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC17.13■□□□□ 0.33
Clcn1Q64347 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clcn1Q64347 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC17.13■□□□□ 0.33
Clcn1Q64347 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clcn1Q64347 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Clcn1Q64347 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clcn1Q64347 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clcn1Q64347 Mypopos-202ENSMUST00000205975 2321 ntBASIC17.13■□□□□ 0.33
Clcn1Q64347 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clcn1Q64347 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clcn1Q64347 Gm8706-201ENSMUST00000197372 1491 ntBASIC17.12■□□□□ 0.33
Clcn1Q64347 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn1Q64347 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn1Q64347 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
Clcn1Q64347 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn1Q64347 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn1Q64347 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn1Q64347 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn1Q64347 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC17.12■□□□□ 0.33
Clcn1Q64347 Gm13350-201ENSMUST00000120519 479 ntBASIC17.12■□□□□ 0.33
Clcn1Q64347 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn1Q64347 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC17.12■□□□□ 0.33
Clcn1Q64347 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn1Q64347 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn1Q64347 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC17.12■□□□□ 0.33
Clcn1Q64347 AC131997.1-201ENSMUST00000228611 1229 ntBASIC17.12■□□□□ 0.33
Clcn1Q64347 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Clcn1Q64347 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn1Q64347 Gm10040-201ENSMUST00000080726 1662 ntBASIC17.12■□□□□ 0.33
Clcn1Q64347 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn1Q64347 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn1Q64347 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn1Q64347 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
Clcn1Q64347 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn1Q64347 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Clcn1Q64347 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Clcn1Q64347 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn1Q64347 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn1Q64347 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn1Q64347 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn1Q64347 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC17.11■□□□□ 0.33
Clcn1Q64347 AC164107.1-201ENSMUST00000227730 2161 ntBASIC17.11■□□□□ 0.33
Clcn1Q64347 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn1Q64347 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn1Q64347 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC17.11■□□□□ 0.33
Clcn1Q64347 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC17.11■□□□□ 0.33
Clcn1Q64347 Gm8584-201ENSMUST00000171982 758 ntBASIC17.11■□□□□ 0.33
Clcn1Q64347 Gm7029-201ENSMUST00000173226 450 ntBASIC17.11■□□□□ 0.33
Clcn1Q64347 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn1Q64347 Gm4959-201ENSMUST00000197271 1044 ntBASIC17.11■□□□□ 0.33
Clcn1Q64347 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC17.11■□□□□ 0.33
Clcn1Q64347 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC17.11■□□□□ 0.33
Clcn1Q64347 Gm32390-201ENSMUST00000212713 1172 ntBASIC17.11■□□□□ 0.33
Clcn1Q64347 AC153937.1-201ENSMUST00000218734 412 ntBASIC17.11■□□□□ 0.33
Clcn1Q64347 Snora73a-201ENSMUST00000082453 205 ntBASIC17.11■□□□□ 0.33
Clcn1Q64347 Gm10268-201ENSMUST00000085340 555 ntBASIC17.11■□□□□ 0.33
Clcn1Q64347 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn1Q64347 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Clcn1Q64347 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC17.11■□□□□ 0.33
Clcn1Q64347 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn1Q64347 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn1Q64347 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Clcn1Q64347 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn1Q64347 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn1Q64347 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn1Q64347 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn1Q64347 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Clcn1Q64347 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
Clcn1Q64347 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn1Q64347 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC17.1■□□□□ 0.33
Clcn1Q64347 Mir686-201ENSMUST00000102174 109 ntBASIC17.1■□□□□ 0.33
Clcn1Q64347 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC17.1■□□□□ 0.33
Clcn1Q64347 Gm25261-201ENSMUST00000157416 134 ntBASIC17.1■□□□□ 0.33
Clcn1Q64347 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn1Q64347 Gm8801-201ENSMUST00000173255 1064 ntBASIC17.1■□□□□ 0.33
Clcn1Q64347 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn1Q64347 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC17.1■□□□□ 0.33
Clcn1Q64347 Gm37102-201ENSMUST00000195740 1105 ntBASIC17.1■□□□□ 0.33
Clcn1Q64347 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC17.1■□□□□ 0.33
Clcn1Q64347 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn1Q64347 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC17.1■□□□□ 0.33
Clcn1Q64347 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Clcn1Q64347 Gm17330-201ENSMUST00000221047 165 ntBASIC17.1■□□□□ 0.33
Clcn1Q64347 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC17.1■□□□□ 0.33
Clcn1Q64347 AC133598.1-201ENSMUST00000224327 660 ntBASIC17.1■□□□□ 0.33
Clcn1Q64347 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn1Q64347 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn1Q64347 Gm9755-201ENSMUST00000032981 1356 ntBASIC17.1■□□□□ 0.33
Clcn1Q64347 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn1Q64347 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Clcn1Q64347 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn1Q64347 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC17.1■□□□□ 0.33
Clcn1Q64347 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn1Q64347 Gm28182-201ENSMUST00000188354 2477 ntBASIC17.1■□□□□ 0.33
Clcn1Q64347 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn1Q64347 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC17.1■□□□□ 0.33
Clcn1Q64347 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms