Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rai1Q61818 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rai1Q61818 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rai1Q61818 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rai1Q61818 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rai1Q61818 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Rai1Q61818 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.88□□□□□ -0.35
Rai1Q61818 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rai1Q61818 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rai1Q61818 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rai1Q61818 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.88□□□□□ -0.35
Rai1Q61818 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rai1Q61818 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rai1Q61818 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rai1Q61818 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rai1Q61818 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rai1Q61818 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Rai1Q61818 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rai1Q61818 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.88□□□□□ -0.35
Rai1Q61818 Gm11439-201ENSMUST00000118598 409 ntBASIC12.88□□□□□ -0.35
Rai1Q61818 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.88□□□□□ -0.35
Rai1Q61818 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rai1Q61818 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.88□□□□□ -0.35
Rai1Q61818 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rai1Q61818 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.88□□□□□ -0.35
Rai1Q61818 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rai1Q61818 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rai1Q61818 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rai1Q61818 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rai1Q61818 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.88□□□□□ -0.35
Rai1Q61818 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.88□□□□□ -0.35
Rai1Q61818 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rai1Q61818 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Rai1Q61818 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rai1Q61818 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rai1Q61818 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rai1Q61818 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rai1Q61818 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rai1Q61818 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rai1Q61818 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rai1Q61818 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rai1Q61818 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rai1Q61818 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rai1Q61818 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rai1Q61818 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Rai1Q61818 Gm14704-201ENSMUST00000120300 874 ntBASIC12.87□□□□□ -0.35
Rai1Q61818 Gm8738-201ENSMUST00000172606 329 ntBASIC12.87□□□□□ -0.35
Rai1Q61818 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.87□□□□□ -0.35
Rai1Q61818 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rai1Q61818 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rai1Q61818 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rai1Q61818 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rai1Q61818 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Rai1Q61818 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rai1Q61818 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rai1Q61818 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rai1Q61818 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rai1Q61818 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rai1Q61818 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rai1Q61818 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rai1Q61818 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.87□□□□□ -0.35
Rai1Q61818 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rai1Q61818 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rai1Q61818 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rai1Q61818 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rai1Q61818 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rai1Q61818 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rai1Q61818 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rai1Q61818 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rai1Q61818 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.87□□□□□ -0.35
Rai1Q61818 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rai1Q61818 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.87□□□□□ -0.35
Rai1Q61818 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rai1Q61818 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.87□□□□□ -0.35
Rai1Q61818 Gm13316-201ENSMUST00000140537 691 ntBASIC12.87□□□□□ -0.35
Rai1Q61818 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rai1Q61818 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Rai1Q61818 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.87□□□□□ -0.35
Rai1Q61818 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rai1Q61818 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.87□□□□□ -0.35
Rai1Q61818 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.87□□□□□ -0.35
Rai1Q61818 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rai1Q61818 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rai1Q61818 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rai1Q61818 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rai1Q61818 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rai1Q61818 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Rai1Q61818 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rai1Q61818 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rai1Q61818 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rai1Q61818 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.86□□□□□ -0.35
Rai1Q61818 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rai1Q61818 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rai1Q61818 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rai1Q61818 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Rai1Q61818 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.86□□□□□ -0.35
Rai1Q61818 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rai1Q61818 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rai1Q61818 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rai1Q61818 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms