Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Gm38223-201ENSMUST00000194484 695 ntBASIC13.65□□□□□ -0.22
Six4Q61321 Gm42550-201ENSMUST00000201553 960 ntBASIC13.65□□□□□ -0.22
Six4Q61321 Gm45384-201ENSMUST00000210451 277 ntBASIC13.65□□□□□ -0.22
Six4Q61321 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Six4Q61321 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Six4Q61321 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.65□□□□□ -0.22
Six4Q61321 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Six4Q61321 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Six4Q61321 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Six4Q61321 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Six4Q61321 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Six4Q61321 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Six4Q61321 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Six4Q61321 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Six4Q61321 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Six4Q61321 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.65□□□□□ -0.22
Six4Q61321 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Six4Q61321 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Six4Q61321 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Six4Q61321 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Six4Q61321 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Six4Q61321 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Six4Q61321 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Six4Q61321 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Six4Q61321 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.65□□□□□ -0.23
Six4Q61321 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Six4Q61321 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.64□□□□□ -0.23
Six4Q61321 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Six4Q61321 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Six4Q61321 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Six4Q61321 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Six4Q61321 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Six4Q61321 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Six4Q61321 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Six4Q61321 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Six4Q61321 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Six4Q61321 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.64□□□□□ -0.23
Six4Q61321 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Six4Q61321 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Six4Q61321 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Six4Q61321 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Six4Q61321 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Six4Q61321 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.64□□□□□ -0.23
Six4Q61321 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Six4Q61321 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.64□□□□□ -0.23
Six4Q61321 Gm15429-201ENSMUST00000151268 798 ntBASIC13.64□□□□□ -0.23
Six4Q61321 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Six4Q61321 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Six4Q61321 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Six4Q61321 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.64□□□□□ -0.23
Six4Q61321 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Six4Q61321 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Six4Q61321 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Six4Q61321 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Six4Q61321 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Six4Q61321 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Six4Q61321 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Six4Q61321 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Six4Q61321 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Six4Q61321 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Six4Q61321 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Six4Q61321 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Six4Q61321 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Six4Q61321 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Six4Q61321 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Six4Q61321 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Six4Q61321 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Six4Q61321 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Six4Q61321 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Six4Q61321 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Six4Q61321 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Six4Q61321 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Six4Q61321 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Six4Q61321 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Six4Q61321 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.63□□□□□ -0.23
Six4Q61321 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Six4Q61321 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Six4Q61321 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Six4Q61321 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.63□□□□□ -0.23
Six4Q61321 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.63□□□□□ -0.23
Six4Q61321 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Six4Q61321 Gm27701-201ENSMUST00000184498 110 ntBASIC13.63□□□□□ -0.23
Six4Q61321 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Six4Q61321 Gm38144-201ENSMUST00000192790 465 ntBASIC13.63□□□□□ -0.23
Six4Q61321 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.63□□□□□ -0.23
Six4Q61321 Gm6983-201ENSMUST00000214912 628 ntBASIC13.63□□□□□ -0.23
Six4Q61321 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Six4Q61321 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Six4Q61321 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Six4Q61321 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Six4Q61321 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Six4Q61321 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Six4Q61321 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Six4Q61321 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Six4Q61321 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Six4Q61321 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Six4Q61321 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Six4Q61321 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Six4Q61321 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.63□□□□□ -0.23
Six4Q61321 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms