Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Slc6a4Q60857 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Slc6a4Q60857 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Slc6a4Q60857 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Slc6a4Q60857 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Slc6a4Q60857 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Slc6a4Q60857 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Slc6a4Q60857 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.84□□□□□ -0.19
Slc6a4Q60857 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Slc6a4Q60857 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Slc6a4Q60857 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Slc6a4Q60857 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Slc6a4Q60857 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Slc6a4Q60857 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Slc6a4Q60857 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Slc6a4Q60857 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.84□□□□□ -0.19
Slc6a4Q60857 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Slc6a4Q60857 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.84□□□□□ -0.19
Slc6a4Q60857 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Slc6a4Q60857 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.84□□□□□ -0.19
Slc6a4Q60857 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Slc6a4Q60857 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Slc6a4Q60857 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.84□□□□□ -0.19
Slc6a4Q60857 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Slc6a4Q60857 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Slc6a4Q60857 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.84□□□□□ -0.19
Slc6a4Q60857 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.84□□□□□ -0.19
Slc6a4Q60857 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.84□□□□□ -0.19
Slc6a4Q60857 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Slc6a4Q60857 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Slc6a4Q60857 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Slc6a4Q60857 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Slc6a4Q60857 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.84□□□□□ -0.19
Slc6a4Q60857 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Slc6a4Q60857 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Slc6a4Q60857 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Slc6a4Q60857 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Slc6a4Q60857 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Slc6a4Q60857 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Slc6a4Q60857 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Slc6a4Q60857 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Slc6a4Q60857 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Slc6a4Q60857 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Slc6a4Q60857 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Slc6a4Q60857 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.83□□□□□ -0.19
Slc6a4Q60857 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.83□□□□□ -0.19
Slc6a4Q60857 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Slc6a4Q60857 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Slc6a4Q60857 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Slc6a4Q60857 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.83□□□□□ -0.19
Slc6a4Q60857 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Slc6a4Q60857 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.83□□□□□ -0.2
Slc6a4Q60857 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Slc6a4Q60857 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Slc6a4Q60857 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Slc6a4Q60857 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Slc6a4Q60857 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Slc6a4Q60857 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Slc6a4Q60857 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
Slc6a4Q60857 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Slc6a4Q60857 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Slc6a4Q60857 Mir1982-201ENSMUST00000157368 74 ntBASIC13.83□□□□□ -0.2
Slc6a4Q60857 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Slc6a4Q60857 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Slc6a4Q60857 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Slc6a4Q60857 Gm29127-201ENSMUST00000188304 517 ntBASIC13.83□□□□□ -0.2
Slc6a4Q60857 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.83□□□□□ -0.2
Slc6a4Q60857 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.83□□□□□ -0.2
Slc6a4Q60857 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
Slc6a4Q60857 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Slc6a4Q60857 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Slc6a4Q60857 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Slc6a4Q60857 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Slc6a4Q60857 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Slc6a4Q60857 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.83□□□□□ -0.2
Slc6a4Q60857 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Slc6a4Q60857 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Slc6a4Q60857 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Slc6a4Q60857 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Slc6a4Q60857 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Slc6a4Q60857 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Slc6a4Q60857 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Slc6a4Q60857 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Slc6a4Q60857 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Slc6a4Q60857 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Slc6a4Q60857 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Slc6a4Q60857 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Slc6a4Q60857 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Slc6a4Q60857 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Slc6a4Q60857 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.82□□□□□ -0.2
Slc6a4Q60857 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Slc6a4Q60857 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Slc6a4Q60857 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Slc6a4Q60857 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Slc6a4Q60857 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Slc6a4Q60857 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.82□□□□□ -0.2
Slc6a4Q60857 Gm10156-201ENSMUST00000122364 462 ntBASIC13.82□□□□□ -0.2
Slc6a4Q60857 Gm24644-201ENSMUST00000157114 139 ntBASIC13.82□□□□□ -0.2
Slc6a4Q60857 Gm22331-201ENSMUST00000158066 136 ntBASIC13.82□□□□□ -0.2
Slc6a4Q60857 Gm29649-201ENSMUST00000185649 419 ntBASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms