Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav5d-4Q5R1F6 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trav5d-4Q5R1F6 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav5d-4Q5R1F6 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav5d-4Q5R1F6 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav5d-4Q5R1F6 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav5d-4Q5R1F6 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav5d-4Q5R1F6 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Trav5d-4Q5R1F6 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav5d-4Q5R1F6 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav5d-4Q5R1F6 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav5d-4Q5R1F6 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC11.65□□□□□ -0.54
Trav5d-4Q5R1F6 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
Trav5d-4Q5R1F6 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Trav5d-4Q5R1F6 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav5d-4Q5R1F6 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC11.65□□□□□ -0.54
Trav5d-4Q5R1F6 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav5d-4Q5R1F6 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Trav5d-4Q5R1F6 Gm27306-201ENSMUST00000183970 107 ntBASIC11.65□□□□□ -0.54
Trav5d-4Q5R1F6 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav5d-4Q5R1F6 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC11.65□□□□□ -0.54
Trav5d-4Q5R1F6 AC154595.3-201ENSMUST00000224579 384 ntBASIC11.65□□□□□ -0.54
Trav5d-4Q5R1F6 AC238811.1-201ENSMUST00000225302 441 ntBASIC11.65□□□□□ -0.54
Trav5d-4Q5R1F6 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav5d-4Q5R1F6 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav5d-4Q5R1F6 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav5d-4Q5R1F6 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav5d-4Q5R1F6 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav5d-4Q5R1F6 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav5d-4Q5R1F6 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav5d-4Q5R1F6 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav5d-4Q5R1F6 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav5d-4Q5R1F6 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.65□□□□□ -0.54
Trav5d-4Q5R1F6 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav5d-4Q5R1F6 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav5d-4Q5R1F6 Gm37019-201ENSMUST00000192133 2134 ntBASIC11.65□□□□□ -0.55
Trav5d-4Q5R1F6 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.55
Trav5d-4Q5R1F6 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav5d-4Q5R1F6 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Trav5d-4Q5R1F6 Gm14452-201ENSMUST00000118680 1632 ntBASIC11.64□□□□□ -0.55
Trav5d-4Q5R1F6 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trav5d-4Q5R1F6 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Trav5d-4Q5R1F6 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav5d-4Q5R1F6 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav5d-4Q5R1F6 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav5d-4Q5R1F6 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav5d-4Q5R1F6 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav5d-4Q5R1F6 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav5d-4Q5R1F6 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav5d-4Q5R1F6 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav5d-4Q5R1F6 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav5d-4Q5R1F6 Gm13859-201ENSMUST00000119936 1423 ntBASIC11.64□□□□□ -0.55
Trav5d-4Q5R1F6 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav5d-4Q5R1F6 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Trav5d-4Q5R1F6 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trav5d-4Q5R1F6 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Trav5d-4Q5R1F6 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav5d-4Q5R1F6 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav5d-4Q5R1F6 Gm12151-201ENSMUST00000121374 290 ntBASIC11.64□□□□□ -0.55
Trav5d-4Q5R1F6 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Trav5d-4Q5R1F6 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav5d-4Q5R1F6 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav5d-4Q5R1F6 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav5d-4Q5R1F6 Gm44872-201ENSMUST00000207864 420 ntBASIC11.64□□□□□ -0.55
Trav5d-4Q5R1F6 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav5d-4Q5R1F6 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav5d-4Q5R1F6 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav5d-4Q5R1F6 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav5d-4Q5R1F6 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav5d-4Q5R1F6 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav5d-4Q5R1F6 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav5d-4Q5R1F6 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav5d-4Q5R1F6 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Trav5d-4Q5R1F6 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav5d-4Q5R1F6 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav5d-4Q5R1F6 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav5d-4Q5R1F6 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav5d-4Q5R1F6 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav5d-4Q5R1F6 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav5d-4Q5R1F6 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav5d-4Q5R1F6 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav5d-4Q5R1F6 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav5d-4Q5R1F6 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav5d-4Q5R1F6 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trav5d-4Q5R1F6 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav5d-4Q5R1F6 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trav5d-4Q5R1F6 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav5d-4Q5R1F6 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav5d-4Q5R1F6 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav5d-4Q5R1F6 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav5d-4Q5R1F6 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav5d-4Q5R1F6 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav5d-4Q5R1F6 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trav5d-4Q5R1F6 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav5d-4Q5R1F6 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC11.63□□□□□ -0.55
Trav5d-4Q5R1F6 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
Trav5d-4Q5R1F6 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav5d-4Q5R1F6 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC11.63□□□□□ -0.55
Trav5d-4Q5R1F6 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav5d-4Q5R1F6 Gm9522-201ENSMUST00000182394 926 ntBASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms