Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf20Q5DTM8 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf20Q5DTM8 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Rnf20Q5DTM8 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf20Q5DTM8 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf20Q5DTM8 Gm15321-201ENSMUST00000121290 288 ntBASIC16.12■□□□□ 0.17
Rnf20Q5DTM8 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf20Q5DTM8 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf20Q5DTM8 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf20Q5DTM8 Gm5279-201ENSMUST00000199575 745 ntBASIC16.12■□□□□ 0.17
Rnf20Q5DTM8 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC16.12■□□□□ 0.17
Rnf20Q5DTM8 Gm17330-201ENSMUST00000221047 165 ntBASIC16.12■□□□□ 0.17
Rnf20Q5DTM8 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf20Q5DTM8 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf20Q5DTM8 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Rnf20Q5DTM8 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf20Q5DTM8 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf20Q5DTM8 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
Rnf20Q5DTM8 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf20Q5DTM8 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf20Q5DTM8 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Rnf20Q5DTM8 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf20Q5DTM8 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Rnf20Q5DTM8 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf20Q5DTM8 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf20Q5DTM8 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf20Q5DTM8 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf20Q5DTM8 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC16.11■□□□□ 0.17
Rnf20Q5DTM8 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf20Q5DTM8 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf20Q5DTM8 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf20Q5DTM8 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf20Q5DTM8 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf20Q5DTM8 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf20Q5DTM8 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf20Q5DTM8 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC16.11■□□□□ 0.17
Rnf20Q5DTM8 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Rnf20Q5DTM8 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC16.11■□□□□ 0.17
Rnf20Q5DTM8 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf20Q5DTM8 Gm28760-201ENSMUST00000185995 736 ntBASIC16.11■□□□□ 0.17
Rnf20Q5DTM8 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Rnf20Q5DTM8 Gm20949-201ENSMUST00000206478 952 ntBASIC16.11■□□□□ 0.17
Rnf20Q5DTM8 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC16.11■□□□□ 0.17
Rnf20Q5DTM8 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf20Q5DTM8 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC16.11■□□□□ 0.17
Rnf20Q5DTM8 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Rnf20Q5DTM8 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf20Q5DTM8 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf20Q5DTM8 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf20Q5DTM8 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf20Q5DTM8 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf20Q5DTM8 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf20Q5DTM8 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf20Q5DTM8 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf20Q5DTM8 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf20Q5DTM8 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC16.1■□□□□ 0.17
Rnf20Q5DTM8 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Rnf20Q5DTM8 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf20Q5DTM8 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Rnf20Q5DTM8 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Rnf20Q5DTM8 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Rnf20Q5DTM8 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf20Q5DTM8 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC16.1■□□□□ 0.17
Rnf20Q5DTM8 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf20Q5DTM8 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf20Q5DTM8 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Rnf20Q5DTM8 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC16.1■□□□□ 0.17
Rnf20Q5DTM8 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Rnf20Q5DTM8 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC16.1■□□□□ 0.17
Rnf20Q5DTM8 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Rnf20Q5DTM8 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf20Q5DTM8 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf20Q5DTM8 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf20Q5DTM8 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf20Q5DTM8 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf20Q5DTM8 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC16.1■□□□□ 0.17
Rnf20Q5DTM8 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC16.1■□□□□ 0.17
Rnf20Q5DTM8 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf20Q5DTM8 Gm13730-201ENSMUST00000121036 1462 ntBASIC16.1■□□□□ 0.17
Rnf20Q5DTM8 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf20Q5DTM8 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf20Q5DTM8 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf20Q5DTM8 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC16.09■□□□□ 0.17
Rnf20Q5DTM8 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf20Q5DTM8 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf20Q5DTM8 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf20Q5DTM8 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf20Q5DTM8 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf20Q5DTM8 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Rnf20Q5DTM8 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC16.09■□□□□ 0.17
Rnf20Q5DTM8 Gm12485-201ENSMUST00000119641 291 ntBASIC16.09■□□□□ 0.17
Rnf20Q5DTM8 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC16.09■□□□□ 0.17
Rnf20Q5DTM8 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf20Q5DTM8 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC16.09■□□□□ 0.17
Rnf20Q5DTM8 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC16.09■□□□□ 0.17
Rnf20Q5DTM8 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf20Q5DTM8 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf20Q5DTM8 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rnf20Q5DTM8 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC16.09■□□□□ 0.17
Rnf20Q5DTM8 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms