Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nlrc4Q3UP24 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Nlrc4Q3UP24 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Nlrc4Q3UP24 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Nlrc4Q3UP24 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nlrc4Q3UP24 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nlrc4Q3UP24 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nlrc4Q3UP24 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nlrc4Q3UP24 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.25□□□□□ -0.13
Nlrc4Q3UP24 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nlrc4Q3UP24 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nlrc4Q3UP24 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nlrc4Q3UP24 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nlrc4Q3UP24 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nlrc4Q3UP24 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Nlrc4Q3UP24 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nlrc4Q3UP24 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.24□□□□□ -0.13
Nlrc4Q3UP24 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nlrc4Q3UP24 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nlrc4Q3UP24 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nlrc4Q3UP24 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Nlrc4Q3UP24 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nlrc4Q3UP24 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nlrc4Q3UP24 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nlrc4Q3UP24 Gm38144-201ENSMUST00000192790 465 ntBASIC14.24□□□□□ -0.13
Nlrc4Q3UP24 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.24□□□□□ -0.13
Nlrc4Q3UP24 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nlrc4Q3UP24 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.24□□□□□ -0.13
Nlrc4Q3UP24 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nlrc4Q3UP24 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Nlrc4Q3UP24 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nlrc4Q3UP24 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nlrc4Q3UP24 Matn2-206ENSMUST00000228570 2798 ntBASIC14.24□□□□□ -0.13
Nlrc4Q3UP24 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nlrc4Q3UP24 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nlrc4Q3UP24 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Nlrc4Q3UP24 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nlrc4Q3UP24 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.24□□□□□ -0.13
Nlrc4Q3UP24 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nlrc4Q3UP24 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nlrc4Q3UP24 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.23□□□□□ -0.13
Nlrc4Q3UP24 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Nlrc4Q3UP24 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.23□□□□□ -0.13
Nlrc4Q3UP24 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Nlrc4Q3UP24 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nlrc4Q3UP24 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nlrc4Q3UP24 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nlrc4Q3UP24 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nlrc4Q3UP24 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nlrc4Q3UP24 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nlrc4Q3UP24 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nlrc4Q3UP24 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Nlrc4Q3UP24 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nlrc4Q3UP24 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Nlrc4Q3UP24 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Nlrc4Q3UP24 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nlrc4Q3UP24 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nlrc4Q3UP24 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nlrc4Q3UP24 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nlrc4Q3UP24 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14.23□□□□□ -0.13
Nlrc4Q3UP24 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.23□□□□□ -0.13
Nlrc4Q3UP24 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Nlrc4Q3UP24 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nlrc4Q3UP24 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Nlrc4Q3UP24 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nlrc4Q3UP24 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nlrc4Q3UP24 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nlrc4Q3UP24 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.23□□□□□ -0.13
Nlrc4Q3UP24 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nlrc4Q3UP24 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Nlrc4Q3UP24 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nlrc4Q3UP24 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nlrc4Q3UP24 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nlrc4Q3UP24 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nlrc4Q3UP24 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.23□□□□□ -0.13
Nlrc4Q3UP24 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nlrc4Q3UP24 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nlrc4Q3UP24 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nlrc4Q3UP24 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nlrc4Q3UP24 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nlrc4Q3UP24 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nlrc4Q3UP24 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.22□□□□□ -0.13
Nlrc4Q3UP24 Gm15163-201ENSMUST00000120749 1302 ntBASIC14.22□□□□□ -0.13
Nlrc4Q3UP24 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nlrc4Q3UP24 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nlrc4Q3UP24 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Nlrc4Q3UP24 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nlrc4Q3UP24 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nlrc4Q3UP24 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nlrc4Q3UP24 Gm15371-201ENSMUST00000117057 784 ntBASIC14.22□□□□□ -0.13
Nlrc4Q3UP24 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Nlrc4Q3UP24 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.22□□□□□ -0.13
Nlrc4Q3UP24 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.22□□□□□ -0.13
Nlrc4Q3UP24 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.22□□□□□ -0.13
Nlrc4Q3UP24 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nlrc4Q3UP24 Gm44397-201ENSMUST00000195950 113 ntBASIC14.22□□□□□ -0.13
Nlrc4Q3UP24 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC14.22□□□□□ -0.13
Nlrc4Q3UP24 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nlrc4Q3UP24 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nlrc4Q3UP24 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms